RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 C18orf32Q8TCD1 76 aa10.62□□□□□ -0.71
PDZRN3-207ENST00000478209 ERASQ7Z444 233 aa10.61□□□□□ -0.71
PDZRN3-207ENST00000478209 SCGB3A1Q96QR1 104 aa10.61□□□□□ -0.71
PDZRN3-207ENST00000478209 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
PDZRN3-207ENST00000478209 IGHV3OR16-9A0A0B4J2B5 98 aa10.6□□□□□ -0.71
PDZRN3-207ENST00000478209 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
PDZRN3-207ENST00000478209 AMELXQ99217 191 aa10.6□□□□□ -0.71
PDZRN3-207ENST00000478209 UBE2D1P51668 147 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 RAB5BP61020 215 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 LINC00242Q5T6M2 205 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 SDIM1Q6ZPB5 146 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 CHAC1Q9BUX1 264 aa10.59□□□□□ -0.71
PDZRN3-207ENST00000478209 HSPG2P98160 4391 aa10.58□□□□□ -0.72
PDZRN3-207ENST00000478209 LINC00614P0C842 121 aa10.58□□□□□ -0.72
PDZRN3-207ENST00000478209 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
PDZRN3-207ENST00000478209 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
PDZRN3-207ENST00000478209 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 SPAG11BQ08648 103 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 OR10D4PQ8NGN7 298 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 PKIGQ9Y2B9 76 aa10.57□□□□□ -0.72
PDZRN3-207ENST00000478209 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
PDZRN3-207ENST00000478209 SEC11AP67812 179 aa10.56□□□□□ -0.72
PDZRN3-207ENST00000478209 A0A087WZ39 114 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 HBDP02042 147 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 COX6A2Q02221 97 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
PDZRN3-207ENST00000478209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 HERVK_113P63121 156 aa10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 FAM19A3Q7Z5A8 133 aa10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-207ENST00000478209 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
PDZRN3-207ENST00000478209 TRGC2P03986 189 aa10.53□□□□□ -0.72
PDZRN3-207ENST00000478209 Q5VSD8 79 aa10.53□□□□□ -0.72
PDZRN3-207ENST00000478209 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
PDZRN3-207ENST00000478209 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
PDZRN3-207ENST00000478209 A0A096LNJ9 63 aa10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 F8WDY8 70 aa10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 PMVKQ15126 192 aa10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 Q6ZRU5 148 aa10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 DPH3Q96FX2 82 aa10.52□□□□□ -0.73
PDZRN3-207ENST00000478209 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
PDZRN3-207ENST00000478209 CHTF8P0CG12 524 aa10.51□□□□□ -0.73
PDZRN3-207ENST00000478209 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-207ENST00000478209 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
PDZRN3-207ENST00000478209 IGKV2-24A0A0C4DH68 120 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 COLCA2A8K830 154 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 PANO1I0J062 215 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 NDUFA1O15239 70 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 BAGE3Q86Y29 109 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 CST9LQ9H4G1 147 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
PDZRN3-207ENST00000478209 ATP5LO75964 103 aa10.49□□□□□ -0.73
PDZRN3-207ENST00000478209 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
PDZRN3-207ENST00000478209 A0A096LNI7 61 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 LOC107984640A0A0U1RRK4 108 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 NDUFA6P56556 154 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 MAJINQ3KP22 176 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 LINC00474Q9P2X8 69 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
PDZRN3-207ENST00000478209 HSBP1O75506 76 aa10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 SCO1O75880 301 aa10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 PLA2G1BP04054 148 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 PRSS2P07478 247 aa10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
PDZRN3-207ENST00000478209 A0A087WYN8 130 aa10.46□□□□□ -0.73
PDZRN3-207ENST00000478209 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
PDZRN3-207ENST00000478209 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
PDZRN3-207ENST00000478209 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
PDZRN3-207ENST00000478209 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
PDZRN3-207ENST00000478209 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
PDZRN3-207ENST00000478209 Q8IZM0 81 aa10.44□□□□□ -0.74
PDZRN3-207ENST00000478209 H3BRM9 83 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 CKS1BP61024 79 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 C6orf226Q5I0X4 101 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 STPG4Q8N801 248 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 PLAC8Q9NZF1 115 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
PDZRN3-207ENST00000478209 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
PDZRN3-207ENST00000478209 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
PDZRN3-207ENST00000478209 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms