RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 CUBNO60494 3623 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 A0A0G2JMZ2 1700 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 NUP188Q5SRE5 1749 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 ANKRD30AQ9BXX3 1397 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 ITPR3Q14573 2671 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 KALRNO60229 2985 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 CFTRP13569 1480 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 MAGI1Q96QZ7 1491 aaPredicted RBP-0.59□□□□□ -2.5
TMF1-202ENST00000477872 TRANK1O15050 2925 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 PIGBOS1A0A0B4J2F0 54 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 TRBV7-4A0A0J9YYF1 115 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 LINC00959A0A1B0GUT2 108 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 B2MP61769 119 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 COPZ1P61923 177 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 RPS25P62851 125 aaKnown RBP-0.59□□□□□ -2.5
TMF1-202ENST00000477872 C12orf73Q69YU5 71 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 DPH3Q96FX2 82 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 SPRR4Q96PI1 79 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 MGST2Q99735 147 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 TMEM191AQ9H0A3 160 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 DYNLRB1Q9NP97 96 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 VPS13BQ7Z7G8 4022 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 APOBP04114 4563 aaKnown RBP-0.59□□□□□ -2.5
TMF1-202ENST00000477872 HMGXB3Q12766 1538 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 TET3O43151 1660 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 SCN7AQ01118 1682 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 SONP18583 2426 aaKnown RBP-0.59□□□□□ -2.5
TMF1-202ENST00000477872 SPG11Q96JI7 2443 aa-0.59□□□□□ -2.5
TMF1-202ENST00000477872 AKAP13Q12802 2813 aa-0.6□□□□□ -2.5
TMF1-202ENST00000477872 ANKRD36A6QL64 1941 aa-0.6□□□□□ -2.5
TMF1-202ENST00000477872 PDCD11Q14690 1871 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 XRN1Q8IZH2 1706 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 MARF1Q9Y4F3 1742 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 SETBP1Q9Y6X0 1596 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TRBV7-3A0A075B6L6 115 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 HMGN4O00479 90 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 ARPC5O15511 151 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 SMCO1Q147U7 214 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 DEFB135Q30KP9 77 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TSTD1Q8NFU3 115 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TMEM263Q8WUH6 116 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 PYDC1Q8WXC3 89 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 LSM10Q969L4 123 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TCEAL4Q96EI5 215 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TPT1P8Q9HAU6 139 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 CCDC167Q9P0B6 97 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 ROBO1Q9Y6N7 1651 aa-0.6□□□□□ -2.51
TMF1-202ENST00000477872 TEP1Q99973 2627 aaKnown RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 USP9YO00507 2555 aaPredicted RBP-0.6□□□□□ -2.51
TMF1-202ENST00000477872 DMXL1Q9Y485 3027 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 SMG6Q86US8 1419 aaKnown RBP-0.61□□□□□ -2.51
TMF1-202ENST00000477872 BIRC6Q9NR09 4857 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 LOC285095A0A1B0GVY8 99 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 SFT2D2O95562 160 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 MGPP08493 103 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 COX8AP10176 69 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 HIST1H1DP16402 221 aaKnown RBP-0.61□□□□□ -2.51
TMF1-202ENST00000477872 C10orf113Q5VZT2 155 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 ANP32BQ92688 251 aaKnown RBP-0.61□□□□□ -2.51
TMF1-202ENST00000477872 COPZ2Q9P299 210 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 DNAH2Q9P225 4427 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 KIAA1551Q9HCM1 1747 aa-0.61□□□□□ -2.51
TMF1-202ENST00000477872 COL4A6Q14031 1691 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 HECTD1Q9ULT8 2610 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 CPSF1Q10570 1443 aaKnown RBP-0.62□□□□□ -2.51
TMF1-202ENST00000477872 KNL1Q8NG31 2342 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 PTPN23Q9H3S7 1636 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 DNAH11Q96DT5 4516 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 SYS1-DBNDD2H3BUS1 97 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 SMIM21Q3B7S5 101 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 MRPL54Q6P161 138 aaKnown RBP-0.62□□□□□ -2.51
TMF1-202ENST00000477872 COPS9Q8WXC6 57 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 TSLPQ969D9 159 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 USMG5Q96IX5 58 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 SPRR2FQ96RM1 72 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 PDCD10Q9BUL8 212 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 RERGLQ9H628 205 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 APLNQ9ULZ1 77 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 SERP1Q9Y6X1 66 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 ANK3Q12955 4377 aaKnown RBP-0.62□□□□□ -2.51
TMF1-202ENST00000477872 ADAMTS12P58397 1594 aa-0.62□□□□□ -2.51
TMF1-202ENST00000477872 LAMA2P24043 3122 aaKnown RBP-0.62□□□□□ -2.51
TMF1-202ENST00000477872 EHBP1L1Q8N3D4 1523 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 MYO18BQ8IUG5 2567 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 IFNGP01579 166 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 IGLC1P0CG04 106 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 DEFB112Q30KQ8 113 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 AKAP14Q86UN6 197 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 MYOZ3Q8TDC0 251 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 LZICQ8WZA0 190 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 FAM167A-AS1Q96KT0 104 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 SNRNP25Q9BV90 132 aaKnown RBP-0.63□□□□□ -2.51
TMF1-202ENST00000477872 SPANXDQ9BXN6 97 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 NAA60Q9H7X0 242 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 CDC42SE2Q9NRR3 84 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 C1orf167Q5SNV9 1468 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 DIP2CQ9Y2E4 1556 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 HYDINQ4G0P3 5121 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 DNAH1Q9P2D7 4330 aa-0.63□□□□□ -2.51
TMF1-202ENST00000477872 A0A0C4DFX4 3053 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms