RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GZMBP10144 247 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 RPS10P46783 165 aaKnown RBP2.78□□□□□ -1.96
CKS1B-207ENST00000477676 SULT1A2P50226 295 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 SERF2P84101 59 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 RPL7L1Q6DKI1 246 aaKnown RBP2.78□□□□□ -1.96
CKS1B-207ENST00000477676 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 C7orf33Q8WU49 177 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 LINC00526Q96FQ7 95 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 AQP10Q96PS8 301 aa2.78□□□□□ -1.96
CKS1B-207ENST00000477676 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
CKS1B-207ENST00000477676 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.77□□□□□ -1.97
CKS1B-207ENST00000477676 TRAV8-4A0A0B4J246 113 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 IGHV1-24A0A0C4DH33 117 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 A0A1W2PNN7 141 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 G3V3Q6 166 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 H7C1H1 209 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 ARPC5O15511 151 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 P01737 135 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 CXCL1P09341 107 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 RPS20P60866 119 aaKnown RBP2.77□□□□□ -1.97
CKS1B-207ENST00000477676 PKIAP61925 76 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 FMC1Q96HJ9 113 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 TMEM243Q9BU79 118 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 DPH3P1Q9H4G8 78 aa2.77□□□□□ -1.97
CKS1B-207ENST00000477676 MAP1LC3B2A6NCE7 125 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 IFNA1P01562 189 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 IGLC6P0CF74 106 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 PMVKQ15126 192 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 TMEM97Q5BJF2 176 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 REG3GQ6UW15 175 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 KRTAP11-1Q8IUC1 163 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 CHCHD10Q8WYQ3 142 aaPredicted RBP2.76□□□□□ -1.97
CKS1B-207ENST00000477676 C11orf52Q96A22 123 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 NKX6-2Q9C056 277 aaPredicted RBP2.76□□□□□ -1.97
CKS1B-207ENST00000477676 MAP1LC3BQ9GZQ8 125 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 CYTL1Q9NRR1 136 aa2.76□□□□□ -1.97
CKS1B-207ENST00000477676 IGKV3OR2-268A0A0C4DH90 116 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 DLEU1O43261 78 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 MGPP08493 103 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 GIPP09681 153 aaPredicted RBP2.75□□□□□ -1.97
CKS1B-207ENST00000477676 AKR1C3P42330 323 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 DEFA1P59665 94 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 UBE2G1P62253 170 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 FAM74A3Q4VXF1 159 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 SPANXN1Q5VSR9 72 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 Q6ZRP5 223 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 LINC00299Q6ZSB3 139 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 S100ZQ8WXG8 99 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 PGLYRP4Q96LB8 373 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 AP1S3Q96PC3 154 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
CKS1B-207ENST00000477676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
CKS1B-207ENST00000477676 TRAV26-2A0A0B4J265 109 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 A0A1B0GV90 55 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 A0A1B0GVG6 124 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 IGKV2-29A2NJV5 120 aaPredicted RBP2.74□□□□□ -1.97
CKS1B-207ENST00000477676 FAM231BA6NCW3 169 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 K7ERU9 68 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 PDE6DO43924 150 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 RPL32P62910 135 aaKnown RBP2.74□□□□□ -1.97
CKS1B-207ENST00000477676 ADAMTSL4-AS1Q5T5F5 129 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 TMUB2Q71RG4 321 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 GATD1Q8NB37 220 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 RPL39LQ96EH5 51 aaKnown RBP2.74□□□□□ -1.97
CKS1B-207ENST00000477676 RPS10P5Q9NQ39 176 aa2.74□□□□□ -1.97
CKS1B-207ENST00000477676 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 A0A1B0GV50 99 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 C19orf71A6NCJ1 209 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 KRTAP16-1A8MUX0 517 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 BCL2P10415 239 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 NTF3P20783 257 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 RPL35P42766 123 aaKnown RBP2.73□□□□□ -1.97
CKS1B-207ENST00000477676 XCL1P47992 114 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 FOXA3P55318 350 aaPredicted RBP2.73□□□□□ -1.97
CKS1B-207ENST00000477676 CCL20P78556 96 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 TAL2Q16559 108 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 AKR1C8PQ5T2L2 129 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 UQCC3Q6UW78 93 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 LYZL1Q6UWQ5 148 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 PHF5AQ7RTV0 110 aaKnown RBP2.73□□□□□ -1.97
CKS1B-207ENST00000477676 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 MBD3L1Q8WWY6 194 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 VPS25Q9BRG1 176 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 OCR1Q9BZK8 76 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 NIT2Q9NQR4 276 aa2.73□□□□□ -1.97
CKS1B-207ENST00000477676 TRBV20OR9-2A0A075B6H5 130 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-207ENST00000477676 UBE2L6O14933 153 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms