RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CDC42BPGQ6DT37 1551 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 MYO5CQ9NQX4 1742 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-208ENST00000477447 MICAL3Q7RTP6 2002 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 ALPK2Q86TB3 2170 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 ATP7BP35670 1465 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 LRRC37A3O60309 1634 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 RNF17Q9BXT8 1623 aaKnown RBP0.68□□□□□ -2.3
TARDBP-208ENST00000477447 PPLO60437 1756 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 HELZP42694 1942 aaKnown RBP0.68□□□□□ -2.3
TARDBP-208ENST00000477447 A0A087WVE0 104 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 M0R135 149 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 INE1O15225 51 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 S100A3P33764 101 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 GDF5OSQ5U4N7 250 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 C6orf201Q7Z4U5 140 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 C5orf56Q8N8D9 126 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 FDCSPQ8NFU4 85 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 Q96NJ1 140 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 WFDC6Q9BQY6 131 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 LINC00846Q9NV44 126 aa0.68□□□□□ -2.3
TARDBP-208ENST00000477447 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
TARDBP-208ENST00000477447 ABCA6Q8N139 1617 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 USP32Q8NFA0 1604 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
TARDBP-208ENST00000477447 FANCMQ8IYD8 2048 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 DIP2AQ14689 1571 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 EML6Q6ZMW3 1958 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 PARP14Q460N5 1801 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 LCE6AA0A183 80 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 D6R8Y8 96 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 UQCR11O14957 56 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 LEPROTL1O95214 131 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 SPINK7P58062 85 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 LINC00322Q6ZN03 302 aaPredicted RBP0.67□□□□□ -2.3
TARDBP-208ENST00000477447 SMIM5Q71RC9 77 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 MUSTN1Q8IVN3 82 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 LINC00208Q96KT6 92 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 WFDC10AQ9H1F0 79 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 KLK9Q9UKQ9 250 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 R4GMQ9 66 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 MROH2AA6NES4 1674 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 CLTCQ00610 1675 aaKnown RBP0.67□□□□□ -2.3
TARDBP-208ENST00000477447 MYH7P12883 1935 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 ZMYM4Q5VZL5 1548 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 LTN1O94822 1766 aa0.67□□□□□ -2.3
TARDBP-208ENST00000477447 MYO5AQ9Y4I1 1855 aaKnown RBP0.67□□□□□ -2.3
TARDBP-208ENST00000477447 TNRC6AQ8NDV7 1962 aaKnown RBP0.66□□□□□ -2.3
TARDBP-208ENST00000477447 MAST1Q9Y2H9 1570 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 ROS1P08922 2347 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 CACNA1BQ00975 2339 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 ZNF142P52746 1687 aaPredicted RBP0.66□□□□□ -2.3
TARDBP-208ENST00000477447 ITSN2Q9NZM3 1697 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 LRRC7Q96NW7 1537 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
TARDBP-208ENST00000477447 SNRPGP15A8MWD9 76 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 M0R3E3 92 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 DNAL4O96015 105 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 MGPP08493 103 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 IFI6P09912 130 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 FXYD4P59646 89 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 BAGE3Q86Y29 109 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 BAGE2Q86Y30 109 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 V9GYV3 84 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 ANK1P16157 1881 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 LRP6O75581 1613 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 PAPPAQ13219 1627 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 ALKQ9UM73 1620 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 KNDC1Q76NI1 1749 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 UBR1Q8IWV7 1749 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 NWD2Q9ULI1 1742 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 MYH7BA7E2Y1 1941 aa0.66□□□□□ -2.3
TARDBP-208ENST00000477447 KDM3BQ7LBC6 1761 aa0.65□□□□□ -2.3
TARDBP-208ENST00000477447 ANKRD50Q9ULJ7 1429 aa0.65□□□□□ -2.3
TARDBP-208ENST00000477447 PLXNA4Q9HCM2 1894 aa0.65□□□□□ -2.3
TARDBP-208ENST00000477447 SYCP2Q9BX26 1530 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 PIK3C2BO00750 1634 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 NHSL1Q5SYE7 1610 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 TRGV1A0A0A0MS02 117 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 TRAV1-2A0A0B4J238 106 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 LINC00959A0A1B0GUT2 108 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 H0Y9P7 68 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 H3BVH4 76 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 ATXN8Q156A1 80 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 DEFB107AQ8IZN7 70 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 FAM103A1Q9BTL3 118 aaKnown RBP0.65□□□□□ -2.31
TARDBP-208ENST00000477447 FXYD6Q9H0Q3 95 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 TMEM14CQ9P0S9 112 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 SAMD9Q5K651 1589 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 UGGT1Q9NYU2 1555 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
TARDBP-208ENST00000477447 ABCC6O95255 1503 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 LAMC1P11047 1609 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD1P0DJD0 1748 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 ITSN1Q15811 1721 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 MYH6P13533 1939 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms