RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 IGLV10-54A0A075B6I4 117 aa11.71□□□□□ -0.53
SREBF1-211ENST00000476994 CCL25O15444 150 aa11.71□□□□□ -0.53
SREBF1-211ENST00000476994 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
SREBF1-211ENST00000476994 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
SREBF1-211ENST00000476994 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.53
SREBF1-211ENST00000476994 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
SREBF1-211ENST00000476994 PRSS1P07477 247 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 S100A2P29034 98 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 COX6A2Q02221 97 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 FOXI1Q12951 378 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 ODF1Q14990 250 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 SS18Q15532 418 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
SREBF1-211ENST00000476994 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 SYS1-DBNDD2H3BUS1 97 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 EREGO14944 169 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 IGLC3P0DOY3 106 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
SREBF1-211ENST00000476994 IGHV3OR16-9A0A0B4J2B5 98 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 XCL1P47992 114 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 RMI2Q96E14 147 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 KRTAP4-5Q9BYR2 181 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 HSPG2P98160 4391 aa11.67□□□□□ -0.54
SREBF1-211ENST00000476994 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
SREBF1-211ENST00000476994 TINCRA0A1B0GVN0 87 aa11.66□□□□□ -0.54
SREBF1-211ENST00000476994 GAGE12HA6NDE8 117 aa11.66□□□□□ -0.54
SREBF1-211ENST00000476994 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
SREBF1-211ENST00000476994 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
SREBF1-211ENST00000476994 ABCA13Q86UQ4 5058 aa11.66□□□□□ -0.54
SREBF1-211ENST00000476994 F8VRH5 84 aa11.65□□□□□ -0.54
SREBF1-211ENST00000476994 LINC01545Q5VT33 79 aa11.65□□□□□ -0.54
SREBF1-211ENST00000476994 Q8N1X5 172 aa11.65□□□□□ -0.54
SREBF1-211ENST00000476994 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
SREBF1-211ENST00000476994 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
SREBF1-211ENST00000476994 H0Y8G0 127 aa11.64□□□□□ -0.55
SREBF1-211ENST00000476994 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
SREBF1-211ENST00000476994 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
SREBF1-211ENST00000476994 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
SREBF1-211ENST00000476994 KRTDAPP60985 99 aa11.63□□□□□ -0.55
SREBF1-211ENST00000476994 HERVK_113P63121 156 aa11.63□□□□□ -0.55
SREBF1-211ENST00000476994 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
SREBF1-211ENST00000476994 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
SREBF1-211ENST00000476994 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-211ENST00000476994 SEC11AP67812 179 aa11.62□□□□□ -0.55
SREBF1-211ENST00000476994 WFDC2Q14508 124 aa11.62□□□□□ -0.55
SREBF1-211ENST00000476994 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
SREBF1-211ENST00000476994 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
SREBF1-211ENST00000476994 A0A087WZ39 114 aa11.61□□□□□ -0.55
SREBF1-211ENST00000476994 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
SREBF1-211ENST00000476994 C5orf38Q86SI9 138 aa11.61□□□□□ -0.55
SREBF1-211ENST00000476994 OR10D4PQ8NGN7 298 aa11.61□□□□□ -0.55
SREBF1-211ENST00000476994 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
SREBF1-211ENST00000476994 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
SREBF1-211ENST00000476994 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
SREBF1-211ENST00000476994 DNAH5Q8TE73 4624 aa11.59□□□□□ -0.55
SREBF1-211ENST00000476994 COX7A2LO14548 114 aa11.59□□□□□ -0.55
SREBF1-211ENST00000476994 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
SREBF1-211ENST00000476994 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
SREBF1-211ENST00000476994 LINC00469Q8N7U9 141 aa11.58□□□□□ -0.56
SREBF1-211ENST00000476994 PSCAO43653 123 aa11.57□□□□□ -0.56
SREBF1-211ENST00000476994 DPM2O94777 84 aa11.57□□□□□ -0.56
SREBF1-211ENST00000476994 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
SREBF1-211ENST00000476994 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
SREBF1-211ENST00000476994 IGKCP01834 107 aa11.56□□□□□ -0.56
SREBF1-211ENST00000476994 PLNP26678 52 aa11.56□□□□□ -0.56
SREBF1-211ENST00000476994 APOBP04114 4563 aaKnown RBP11.55□□□□□ -0.56
SREBF1-211ENST00000476994 IGHV3-64A0A075B6Q5 118 aa11.55□□□□□ -0.56
SREBF1-211ENST00000476994 A0A087WTM6 91 aa11.55□□□□□ -0.56
SREBF1-211ENST00000476994 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-211ENST00000476994 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
SREBF1-211ENST00000476994 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
SREBF1-211ENST00000476994 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
SREBF1-211ENST00000476994 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
SREBF1-211ENST00000476994 LECT2O14960 151 aa11.54□□□□□ -0.56
SREBF1-211ENST00000476994 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
SREBF1-211ENST00000476994 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
SREBF1-211ENST00000476994 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
SREBF1-211ENST00000476994 C20orf202A1L168 122 aa11.52□□□□□ -0.57
SREBF1-211ENST00000476994 H3BRM9 83 aa11.52□□□□□ -0.57
SREBF1-211ENST00000476994 MALP21145 153 aa11.52□□□□□ -0.57
SREBF1-211ENST00000476994 JOSD1Q15040 202 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-211ENST00000476994 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
SREBF1-211ENST00000476994 APOMO95445 188 aa11.5□□□□□ -0.57
SREBF1-211ENST00000476994 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
SREBF1-211ENST00000476994 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
SREBF1-211ENST00000476994 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
SREBF1-211ENST00000476994 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
SREBF1-211ENST00000476994 Q8N814 137 aa11.49□□□□□ -0.57
SREBF1-211ENST00000476994 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
SREBF1-211ENST00000476994 SLPIP03973 132 aa11.48□□□□□ -0.57
SREBF1-211ENST00000476994 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
SREBF1-211ENST00000476994 PYY3Q5JQD4 70 aa11.48□□□□□ -0.57
SREBF1-211ENST00000476994 Q8IZM0 81 aa11.48□□□□□ -0.57
SREBF1-211ENST00000476994 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-211ENST00000476994 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
SREBF1-211ENST00000476994 SCGB1D1O95968 90 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms