RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 TIMM17AQ99595 171 aa8.74□□□□□ -1.01
HLA-DPA1-246ENST00000476642 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 ERASQ7Z444 233 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 VCX2Q9H322 139 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
HLA-DPA1-246ENST00000476642 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CHCHD1Q96BP2 118 aaKnown RBP8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 CBY1Q9Y3M2 126 aa8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 RYR1P21817 5038 aa8.72□□□□□ -1.01
HLA-DPA1-246ENST00000476642 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 USP17L23D6RBM5 183 aa8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 XCL1P47992 114 aa8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 RNASE13Q5GAN3 156 aaKnown RBP8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
HLA-DPA1-246ENST00000476642 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
HLA-DPA1-246ENST00000476642 LECT2O14960 151 aa8.7□□□□□ -1.02
HLA-DPA1-246ENST00000476642 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
HLA-DPA1-246ENST00000476642 HBDP02042 147 aa8.7□□□□□ -1.02
HLA-DPA1-246ENST00000476642 SEC11AP67812 179 aa8.7□□□□□ -1.02
HLA-DPA1-246ENST00000476642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.69□□□□□ -1.02
HLA-DPA1-246ENST00000476642 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
HLA-DPA1-246ENST00000476642 FOXI1Q12951 378 aa8.69□□□□□ -1.02
HLA-DPA1-246ENST00000476642 AMELXQ99217 191 aa8.69□□□□□ -1.02
HLA-DPA1-246ENST00000476642 OPRPNQ99935 248 aaPredicted RBP8.69□□□□□ -1.02
HLA-DPA1-246ENST00000476642 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 COX7A2LO14548 114 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 HSBP1O75506 76 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 ATP5LO75964 103 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 APOMO95445 188 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 MALP21145 153 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
HLA-DPA1-246ENST00000476642 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 PKD1P98161 4303 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 WFDC2Q14508 124 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 FAM104AQ969W3 186 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
HLA-DPA1-246ENST00000476642 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 hDV102S1A0JD36 115 aa8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 GCSHP23434 173 aa8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 UBE2D1P51668 147 aa8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 MIEN1Q9BRT3 115 aa8.66□□□□□ -1.02
HLA-DPA1-246ENST00000476642 DLEU1O43261 78 aa8.65□□□□□ -1.02
HLA-DPA1-246ENST00000476642 HERVK_113P63121 156 aa8.65□□□□□ -1.02
HLA-DPA1-246ENST00000476642 PMVKQ15126 192 aa8.65□□□□□ -1.02
HLA-DPA1-246ENST00000476642 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.02
HLA-DPA1-246ENST00000476642 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 PRSS1P07477 247 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 LINC01561Q8N1V8 128 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 VAMP8Q9BV40 100 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
HLA-DPA1-246ENST00000476642 A0A096LNJ9 63 aa8.63□□□□□ -1.03
HLA-DPA1-246ENST00000476642 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
HLA-DPA1-246ENST00000476642 COL5A1-AS1Q5SY13 56 aa8.63□□□□□ -1.03
HLA-DPA1-246ENST00000476642 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
HLA-DPA1-246ENST00000476642 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
HLA-DPA1-246ENST00000476642 A0A087WZ39 114 aa8.62□□□□□ -1.03
HLA-DPA1-246ENST00000476642 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
HLA-DPA1-246ENST00000476642 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
HLA-DPA1-246ENST00000476642 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
HLA-DPA1-246ENST00000476642 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
HLA-DPA1-246ENST00000476642 F8WDY8 70 aa8.61□□□□□ -1.03
HLA-DPA1-246ENST00000476642 SERF1AO75920 110 aa8.61□□□□□ -1.03
HLA-DPA1-246ENST00000476642 Q8N1X5 172 aa8.61□□□□□ -1.03
HLA-DPA1-246ENST00000476642 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
HLA-DPA1-246ENST00000476642 C20orf202A1L168 122 aa8.59□□□□□ -1.03
HLA-DPA1-246ENST00000476642 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
HLA-DPA1-246ENST00000476642 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
HLA-DPA1-246ENST00000476642 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
HLA-DPA1-246ENST00000476642 A0A0J9YXV3 536 aa8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 H3BRM9 83 aa8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 COX6A2Q02221 97 aa8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
HLA-DPA1-246ENST00000476642 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
HLA-DPA1-246ENST00000476642 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
HLA-DPA1-246ENST00000476642 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
HLA-DPA1-246ENST00000476642 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
HLA-DPA1-246ENST00000476642 PRSS2P07478 247 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms