RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 DAZ4Q86SG3 579 aaKnown RBP12.53□□□□□ -0.4
ATG4B-217ENST00000475693 TMEM141Q96I45 108 aa12.53□□□□□ -0.4
ATG4B-217ENST00000475693 DAZ3Q9NR90 486 aaKnown RBP12.53□□□□□ -0.4
ATG4B-217ENST00000475693 STARD9Q9P2P6 4700 aa12.53□□□□□ -0.4
ATG4B-217ENST00000475693 HERVK_113P61574 105 aa12.53□□□□□ -0.4
ATG4B-217ENST00000475693 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.4
ATG4B-217ENST00000475693 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
ATG4B-217ENST00000475693 IGIPA6NJ69 53 aa12.52□□□□□ -0.41
ATG4B-217ENST00000475693 C20orf203Q8NBC4 194 aa12.52□□□□□ -0.41
ATG4B-217ENST00000475693 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
ATG4B-217ENST00000475693 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
ATG4B-217ENST00000475693 SH2D6Q7Z4S9 175 aa12.51□□□□□ -0.41
ATG4B-217ENST00000475693 PMVKQ15126 192 aa12.5□□□□□ -0.41
ATG4B-217ENST00000475693 RNASE13Q5GAN3 156 aaKnown RBP12.5□□□□□ -0.41
ATG4B-217ENST00000475693 GTSF1LQ9H1H1 148 aa12.5□□□□□ -0.41
ATG4B-217ENST00000475693 IGLV4-69A0A075B6H9 119 aa12.5□□□□□ -0.41
ATG4B-217ENST00000475693 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
ATG4B-217ENST00000475693 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
ATG4B-217ENST00000475693 Q8N3U1 123 aa12.49□□□□□ -0.41
ATG4B-217ENST00000475693 C11orf86A6NJI1 115 aa12.49□□□□□ -0.41
ATG4B-217ENST00000475693 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.412e-8■■■□□ 15
ATG4B-217ENST00000475693 MRPL23Q16540 153 aaKnown RBP12.49□□□□□ -0.41
ATG4B-217ENST00000475693 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
ATG4B-217ENST00000475693 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
ATG4B-217ENST00000475693 APOMO95445 188 aa12.47□□□□□ -0.41
ATG4B-217ENST00000475693 GAGE6Q13070 117 aa12.47□□□□□ -0.41
ATG4B-217ENST00000475693 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
ATG4B-217ENST00000475693 FOXI1Q12951 378 aa12.47□□□□□ -0.41
ATG4B-217ENST00000475693 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
ATG4B-217ENST00000475693 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
ATG4B-217ENST00000475693 TSPAN13O95857 204 aa12.46□□□□□ -0.41
ATG4B-217ENST00000475693 SMAGPQ0VAQ4 97 aa12.46□□□□□ -0.41
ATG4B-217ENST00000475693 VCX2Q9H322 139 aa12.46□□□□□ -0.42
ATG4B-217ENST00000475693 LYPD5Q6UWN5 251 aa12.45□□□□□ -0.42
ATG4B-217ENST00000475693 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
ATG4B-217ENST00000475693 ESRGQ1W209 222 aa12.45□□□□□ -0.42
ATG4B-217ENST00000475693 UBE2D4Q9Y2X8 147 aa12.45□□□□□ -0.42
ATG4B-217ENST00000475693 A0A1B0GV72 72 aa12.44□□□□□ -0.42
ATG4B-217ENST00000475693 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
ATG4B-217ENST00000475693 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-217ENST00000475693 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
ATG4B-217ENST00000475693 IGHV3-30P01768 117 aa12.43□□□□□ -0.42
ATG4B-217ENST00000475693 IGHV3-30-5P0DP03 117 aa12.43□□□□□ -0.42
ATG4B-217ENST00000475693 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
ATG4B-217ENST00000475693 Q6ZUT4 128 aa12.42□□□□□ -0.42
ATG4B-217ENST00000475693 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 UBE2L6O14933 153 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 H3BNG1 76 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 M0QXV9 152 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 AMELXQ99217 191 aa12.41□□□□□ -0.42
ATG4B-217ENST00000475693 LOC107984156A0A0G2JMH3 177 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 ZFAND6Q6FIF0 208 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 TEN1Q86WV5 123 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 ARL17AQ8IVW1 177 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 MTURNQ8N3F0 131 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
ATG4B-217ENST00000475693 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
ATG4B-217ENST00000475693 CFC1P0CG37 223 aa12.39□□□□□ -0.43
ATG4B-217ENST00000475693 PSMB2P49721 201 aa12.39□□□□□ -0.43
ATG4B-217ENST00000475693 J3QQQ9 107 aa12.39□□□□□ -0.43
ATG4B-217ENST00000475693 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 DGAT2L7PQ6IED9 249 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 WFDC10BQ8IUB3 73 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 PRO1854Q9UHT4 67 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 IGKV3OR2-268A0A0C4DH90 116 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 TSPEAR-AS2P59090 65 aa12.38□□□□□ -0.43
ATG4B-217ENST00000475693 LEPROTO15243 131 aa12.37□□□□□ -0.43
ATG4B-217ENST00000475693 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
ATG4B-217ENST00000475693 LGALS3P17931 250 aaKnown RBP12.37□□□□□ -0.43
ATG4B-217ENST00000475693 LELP1Q5T871 98 aa12.37□□□□□ -0.43
ATG4B-217ENST00000475693 CLPSL2Q6UWE3 100 aa12.37□□□□□ -0.43
ATG4B-217ENST00000475693 TCL1BO95988 128 aa12.36□□□□□ -0.43
ATG4B-217ENST00000475693 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
ATG4B-217ENST00000475693 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
ATG4B-217ENST00000475693 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
ATG4B-217ENST00000475693 CDC42SE2Q9NRR3 84 aa12.35□□□□□ -0.43
ATG4B-217ENST00000475693 SPANXA1Q9NS26 97 aa12.35□□□□□ -0.43
ATG4B-217ENST00000475693 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
ATG4B-217ENST00000475693 IGHV3-33P01772 117 aa12.34□□□□□ -0.43
ATG4B-217ENST00000475693 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
ATG4B-217ENST00000475693 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
ATG4B-217ENST00000475693 C15orf53Q8NAA6 179 aa12.33□□□□□ -0.44
ATG4B-217ENST00000475693 TRAV13-1A0A0B4J241 112 aa12.33□□□□□ -0.44
ATG4B-217ENST00000475693 LINC01600Q96MT4 127 aa12.33□□□□□ -0.44
ATG4B-217ENST00000475693 APLNQ9ULZ1 77 aa12.33□□□□□ -0.44
ATG4B-217ENST00000475693 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
ATG4B-217ENST00000475693 CARD19Q96LW7 228 aa12.32□□□□□ -0.44
ATG4B-217ENST00000475693 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-217ENST00000475693 TMEM101Q96IK0 257 aa12.31□□□□□ -0.44
ATG4B-217ENST00000475693 TIMM21Q9BVV7 248 aa12.31□□□□□ -0.44
ATG4B-217ENST00000475693 CKS1BP61024 79 aa12.31□□□□□ -0.44
ATG4B-217ENST00000475693 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-217ENST00000475693 A4D1N5 150 aa12.3□□□□□ -0.44
ATG4B-217ENST00000475693 H7C423 109 aa12.3□□□□□ -0.44
ATG4B-217ENST00000475693 ANGP03950 147 aaKnown RBP12.3□□□□□ -0.44
ATG4B-217ENST00000475693 LINC00269Q8N2A0 174 aa12.3□□□□□ -0.44
ATG4B-217ENST00000475693 CSDC2Q9Y534 153 aaKnown RBP12.3□□□□□ -0.44
ATG4B-217ENST00000475693 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms