RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
FAM3A-218ENST00000475657 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
FAM3A-218ENST00000475657 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
FAM3A-218ENST00000475657 A0A096LNJ9 63 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 KRTAP9-6A0A140TA67 174 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 FGF6P10767 208 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
FAM3A-218ENST00000475657 GAGE6Q13070 117 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 ENHOQ6UWT2 76 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 C9orf163Q8N9P6 203 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 UBE2D4Q9Y2X8 147 aa8.9□□□□□ -0.98
FAM3A-218ENST00000475657 CSDC2Q9Y534 153 aaKnown RBP8.9□□□□□ -0.98
FAM3A-218ENST00000475657 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 NUPR1O60356 82 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 NPSP0C0P6 89 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
FAM3A-218ENST00000475657 ANGP03950 147 aaKnown RBP8.88□□□□□ -0.99
FAM3A-218ENST00000475657 RBX1P62877 108 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 MPV17L2Q567V2 206 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 PDZD11Q5EBL8 140 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 TIMM17AQ99595 171 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
FAM3A-218ENST00000475657 PANO1I0J062 215 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
FAM3A-218ENST00000475657 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 ERASQ7Z444 233 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 FAM19A2Q8N3H0 131 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
FAM3A-218ENST00000475657 IGIPA6NJ69 53 aa8.86□□□□□ -0.99
FAM3A-218ENST00000475657 ATP5LO75964 103 aa8.86□□□□□ -0.99
FAM3A-218ENST00000475657 CRPP02741 224 aa8.86□□□□□ -0.99
FAM3A-218ENST00000475657 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
FAM3A-218ENST00000475657 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
FAM3A-218ENST00000475657 PACRGQ96M98 296 aaPredicted RBP8.86□□□□□ -0.99
FAM3A-218ENST00000475657 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
FAM3A-218ENST00000475657 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
FAM3A-218ENST00000475657 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 A0A0J9YXV3 536 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 C5orf52A6NGY3 159 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 ODF1Q14990 250 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
FAM3A-218ENST00000475657 IGLV4-60A0A075B6I1 120 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.84□□□□□ -0.99
FAM3A-218ENST00000475657 SNRPEP62304 92 aaKnown RBP8.84□□□□□ -0.99
FAM3A-218ENST00000475657 MUC2Q02817 5179 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 Q6ZN92 141 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 Q6ZUT4 128 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 CDC42SE2Q9NRR3 84 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 HSPB8Q9UJY1 196 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 LPAP08519 4548 aa8.84□□□□□ -0.99
FAM3A-218ENST00000475657 PRSS1P07477 247 aa8.83□□□□□ -1
FAM3A-218ENST00000475657 S100A2P29034 98 aa8.83□□□□□ -1
FAM3A-218ENST00000475657 LINC00269Q8N2A0 174 aa8.82□□□□□ -1
FAM3A-218ENST00000475657 FAM104AQ969W3 186 aa8.82□□□□□ -1
FAM3A-218ENST00000475657 PRR34Q9NV39 138 aa8.82□□□□□ -1
FAM3A-218ENST00000475657 IGLV10-54A0A075B6I4 117 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 FABP4P15090 132 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 AMELXQ99217 191 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 HIST1H2BLQ99880 126 aa8.81□□□□□ -1
FAM3A-218ENST00000475657 OPRPNQ99935 248 aaPredicted RBP8.81□□□□□ -1
FAM3A-218ENST00000475657 REG3AQ06141 175 aa8.8□□□□□ -1
FAM3A-218ENST00000475657 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
FAM3A-218ENST00000475657 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
FAM3A-218ENST00000475657 VCX2Q9H322 139 aa8.8□□□□□ -1
FAM3A-218ENST00000475657 A0A087WYN8 130 aa8.79□□□□□ -1
FAM3A-218ENST00000475657 IFITM10A6NMD0 228 aa8.79□□□□□ -1
FAM3A-218ENST00000475657 PMVKQ15126 192 aa8.79□□□□□ -1
FAM3A-218ENST00000475657 MIAQ16674 131 aa8.79□□□□□ -1
FAM3A-218ENST00000475657 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
FAM3A-218ENST00000475657 KRTAP26-1Q6PEX3 210 aa8.79□□□□□ -1
FAM3A-218ENST00000475657 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
FAM3A-218ENST00000475657 CCL25O15444 150 aa8.78□□□□□ -1
FAM3A-218ENST00000475657 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
FAM3A-218ENST00000475657 C7orf33Q8WU49 177 aa8.78□□□□□ -1
FAM3A-218ENST00000475657 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
FAM3A-218ENST00000475657 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
FAM3A-218ENST00000475657 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
FAM3A-218ENST00000475657 DPH3Q96FX2 82 aa8.77□□□□□ -1.01
FAM3A-218ENST00000475657 CST9LQ9H4G1 147 aa8.77□□□□□ -1.01
FAM3A-218ENST00000475657 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
FAM3A-218ENST00000475657 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
FAM3A-218ENST00000475657 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
FAM3A-218ENST00000475657 UBE2D1P51668 147 aa8.76□□□□□ -1.01
FAM3A-218ENST00000475657 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
FAM3A-218ENST00000475657 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
FAM3A-218ENST00000475657 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
FAM3A-218ENST00000475657 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
FAM3A-218ENST00000475657 SS18Q15532 418 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms