RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PRR9Q5T870 116 aa8.08□□□□□ -1.12
VAPB-204ENST00000475243 EBI3Q14213 229 aa8.08□□□□□ -1.12
VAPB-204ENST00000475243 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
VAPB-204ENST00000475243 NDUFV3P56181 108 aaKnown RBP8.08□□□□□ -1.12
VAPB-204ENST00000475243 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
VAPB-204ENST00000475243 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
VAPB-204ENST00000475243 TSHBP01222 138 aa8.07□□□□□ -1.12
VAPB-204ENST00000475243 IGLV2-11P01706 119 aa8.06□□□□□ -1.12
VAPB-204ENST00000475243 EDN2P20800 178 aa8.06□□□□□ -1.12
VAPB-204ENST00000475243 NRACQ8N912 160 aa8.06□□□□□ -1.12
VAPB-204ENST00000475243 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
VAPB-204ENST00000475243 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 JMJD1CQ15652 2540 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 WFDC13Q8IUB5 93 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 NCOR2Q9Y618 2525 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 TRBV27A0A0K0K1C4 114 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 U3KQK5 164 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
VAPB-204ENST00000475243 UBE2D3P61077 147 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 SMIM11BQ8TCY0 68 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 Q6ZQY7 126 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 NDUFA7O95182 113 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 FSTL3O95633 263 aa8.04□□□□□ -1.12
VAPB-204ENST00000475243 PRR4Q16378 134 aa8.03□□□□□ -1.12
VAPB-204ENST00000475243 LELP1Q5T871 98 aa8.03□□□□□ -1.12
VAPB-204ENST00000475243 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
VAPB-204ENST00000475243 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
VAPB-204ENST00000475243 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
VAPB-204ENST00000475243 MRPS12O15235 138 aaKnown RBP8.03□□□□□ -1.12
VAPB-204ENST00000475243 RETNQ9HD89 108 aa8.02□□□□□ -1.13
VAPB-204ENST00000475243 ABCA12Q86UK0 2595 aa8.02□□□□□ -1.13
VAPB-204ENST00000475243 MUC22E2RYF6 1773 aaPredicted RBP8.02□□□□□ -1.13
VAPB-204ENST00000475243 AVPP01185 164 aa8.02□□□□□ -1.13
VAPB-204ENST00000475243 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 PLAC8L1A1L4L8 177 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 M0R378 163 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 FAM30AQ9NZY2 134 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 PLA2G2AP14555 144 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 UQCRQO14949 82 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 POM121L12Q8N7R1 296 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 PIEZO1Q92508 2521 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 CRIP2P52943 208 aaPredicted RBP8.01□□□□□ -1.13
VAPB-204ENST00000475243 Q8N6K4 173 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 PYGO1Q9Y3Y4 419 aa8.01□□□□□ -1.13
VAPB-204ENST00000475243 TLN1Q9Y490 2541 aaKnown RBP8□□□□□ -1.13
VAPB-204ENST00000475243 SETD2Q9BYW2 2564 aaPredicted RBP8□□□□□ -1.13
VAPB-204ENST00000475243 LOC107984640A0A0U1RRK4 108 aa8□□□□□ -1.13
VAPB-204ENST00000475243 KLLNB2CW77 178 aa8□□□□□ -1.13
VAPB-204ENST00000475243 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
VAPB-204ENST00000475243 KRTAP10-9P60411 292 aa7.99□□□□□ -1.13
VAPB-204ENST00000475243 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
VAPB-204ENST00000475243 BRI3O95415 125 aa7.99□□□□□ -1.13
VAPB-204ENST00000475243 K7ERS5 55 aa7.99□□□□□ -1.13
VAPB-204ENST00000475243 CYSRT1A8MQ03 144 aa7.98□□□□□ -1.13
VAPB-204ENST00000475243 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
VAPB-204ENST00000475243 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
VAPB-204ENST00000475243 MRGPRG-AS1Q2M3A8 158 aa7.98□□□□□ -1.13
VAPB-204ENST00000475243 PRR3P79522 188 aaKnown RBP7.97□□□□□ -1.13
VAPB-204ENST00000475243 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
VAPB-204ENST00000475243 C2orf91Q6ZV80 131 aa7.97□□□□□ -1.13
VAPB-204ENST00000475243 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
VAPB-204ENST00000475243 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
VAPB-204ENST00000475243 UBE2D2P62837 147 aa7.96□□□□□ -1.13
VAPB-204ENST00000475243 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
VAPB-204ENST00000475243 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
VAPB-204ENST00000475243 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.14
VAPB-204ENST00000475243 TIMM17BO60830 172 aa7.96□□□□□ -1.14
VAPB-204ENST00000475243 COX6A2Q02221 97 aa7.96□□□□□ -1.14
VAPB-204ENST00000475243 ATP5EP2Q5VTU8 51 aa7.96□□□□□ -1.14
VAPB-204ENST00000475243 ZNF73O43830 326 aaPredicted RBP7.95□□□□□ -1.14
VAPB-204ENST00000475243 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
VAPB-204ENST00000475243 COX17Q14061 63 aa7.95□□□□□ -1.14
VAPB-204ENST00000475243 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
VAPB-204ENST00000475243 FAM19A3Q7Z5A8 133 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 M0QXV9 152 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 LST1O00453 97 aa7.94□□□□□ -1.14
VAPB-204ENST00000475243 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 C6orf223Q8N319 242 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 A6NED7 52 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 UTRNP46939 3433 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 SERP1Q9Y6X1 66 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 Q8IZM0 81 aa7.93□□□□□ -1.14
VAPB-204ENST00000475243 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
VAPB-204ENST00000475243 FAM240AA0A1B0GVK7 77 aa7.92□□□□□ -1.14
VAPB-204ENST00000475243 Q8N9L7 120 aa7.92□□□□□ -1.14
VAPB-204ENST00000475243 IGLV4-60A0A075B6I1 120 aa7.92□□□□□ -1.14
VAPB-204ENST00000475243 Q6ZTC4 211 aa7.91□□□□□ -1.14
VAPB-204ENST00000475243 LINC00474Q9P2X8 69 aa7.91□□□□□ -1.14
VAPB-204ENST00000475243 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
VAPB-204ENST00000475243 IGIPA6NJ69 53 aa7.9□□□□□ -1.14
VAPB-204ENST00000475243 LINC00242Q5T6M2 205 aa7.9□□□□□ -1.14
VAPB-204ENST00000475243 Q6ZVQ6 151 aa7.9□□□□□ -1.14
VAPB-204ENST00000475243 USP9XQ93008 2570 aaPredicted RBP7.9□□□□□ -1.14
VAPB-204ENST00000475243 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms