RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ERASQ7Z444 233 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 RMI2Q96E14 147 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 FAT1Q14517 4588 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 USP17L23D6RBM5 183 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 PSCAO43653 123 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 SLPIP03973 132 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 PRSS1P07477 247 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 UBE2D1P51668 147 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 COX6A2Q02221 97 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 SPATA12Q7Z6I5 190 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 FAM19A2Q8N3H0 131 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 Q8N814 137 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 C15orf56Q8N910 161 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 TMEM141Q96I45 108 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 SCGB3A1Q96QR1 104 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 TIMM17AQ99595 171 aa4.56□□□□□ -1.68
LIMD1-204ENST00000474665 IFITM10A6NMD0 228 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 C1orf196B1AJZ1 125 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 HBDP02042 147 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 NPSP0C0P6 89 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 BAGE3Q86Y29 109 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 CHCHD1Q96BP2 118 aaKnown RBP4.55□□□□□ -1.68
LIMD1-204ENST00000474665 CST9LQ9H4G1 147 aa4.55□□□□□ -1.68
LIMD1-204ENST00000474665 RAB5BP61020 215 aa4.54□□□□□ -1.68
LIMD1-204ENST00000474665 SS18Q15532 418 aa4.54□□□□□ -1.68
LIMD1-204ENST00000474665 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
LIMD1-204ENST00000474665 C5orf38Q86SI9 138 aa4.54□□□□□ -1.68
LIMD1-204ENST00000474665 VCX2Q9H322 139 aa4.54□□□□□ -1.68
LIMD1-204ENST00000474665 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.53□□□□□ -1.68
LIMD1-204ENST00000474665 GVQW2A0A096LPI5 108 aaPredicted RBP4.53□□□□□ -1.68
LIMD1-204ENST00000474665 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 G0S2P27469 103 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 LINC01620Q4KN68 170 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 COA6Q5JTJ3 125 aaKnown RBP4.53□□□□□ -1.68
LIMD1-204ENST00000474665 TEX43Q6ZNM6 134 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 LINC00526Q96FQ7 95 aa4.53□□□□□ -1.68
LIMD1-204ENST00000474665 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 A0A087WZ39 114 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 LINC01549A6NIU2 74 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 COX7A2LO14548 114 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 HSBP1O75506 76 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 PMVKQ15126 192 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 HIGD2BQ4VC39 106 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 PGPEP1Q9NXJ5 209 aa4.52□□□□□ -1.69
LIMD1-204ENST00000474665 IGLV5-45A0A087WSX0 123 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 hDV102S1A0JD36 115 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.51□□□□□ -1.69
LIMD1-204ENST00000474665 EREGO14944 169 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 ATP5LO75964 103 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
LIMD1-204ENST00000474665 XGP55808 180 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 CNBPP62633 177 aaKnown RBP4.51□□□□□ -1.69
LIMD1-204ENST00000474665 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 PAPPA-AS1Q5QFB9 102 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 Q6ZN92 141 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 IFI27L1Q96BM0 104 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
LIMD1-204ENST00000474665 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 IGHV1-58A0A0C4DH39 117 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 TINCRA0A1B0GVN0 87 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
LIMD1-204ENST00000474665 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 NDUFA6P56556 154 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 CDPF1Q6NVV7 123 aa4.5□□□□□ -1.69
LIMD1-204ENST00000474665 C11orf86A6NJI1 115 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 PANO1I0J062 215 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 FABP4P15090 132 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
LIMD1-204ENST00000474665 GCSHP23434 173 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 ODF1Q14990 250 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 CFAP161Q6P656 301 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 SDIM1Q6ZPB5 146 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 C9orf163Q8N9P6 203 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
LIMD1-204ENST00000474665 TRAV12-1A0A0B4J245 112 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 MALP21145 153 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 HERVK_113P63121 156 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 Q6ZSA8 131 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 LINC01561Q8N1V8 128 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 LINC00469Q8N7U9 141 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 ORAOV1Q8WV07 137 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 CHAC1Q9BUX1 264 aa4.48□□□□□ -1.69
LIMD1-204ENST00000474665 GEMIN7Q9H840 131 aaKnown RBP4.48□□□□□ -1.69
LIMD1-204ENST00000474665 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
LIMD1-204ENST00000474665 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
LIMD1-204ENST00000474665 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms