RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 TRBV10-2A0A0K0K1G8 114 aa14.78□□□□□ -0.04
SMIM11A-204ENST00000474455 TINCRA0A1B0GVN0 87 aa14.78□□□□□ -0.04
SMIM11A-204ENST00000474455 IGHV3-64A0A075B6Q5 118 aa14.77□□□□□ -0.05
SMIM11A-204ENST00000474455 PRKDCP78527 4128 aaKnown RBP14.77□□□□□ -0.05
SMIM11A-204ENST00000474455 PLAC8L1A1L4L8 177 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 TIMM17BO60830 172 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 MRAPQ8TCY5 172 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 TNFRSF18Q9Y5U5 241 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 TRAV26-1A0A087WT03 109 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 SPXQ9BT56 116 aa14.76□□□□□ -0.05
SMIM11A-204ENST00000474455 H7C2G1 150 aa14.75□□□□□ -0.05
SMIM11A-204ENST00000474455 MIAQ16674 131 aa14.75□□□□□ -0.05
SMIM11A-204ENST00000474455 FAM104AQ969W3 186 aa14.75□□□□□ -0.05
SMIM11A-204ENST00000474455 DEFB4AO15263 64 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 COX6CP09669 75 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 ZNF415Q09FC8 603 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 VSIG2Q96IQ7 327 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 DNAJC30Q96LL9 226 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 NDUFA12Q9UI09 145 aa14.74□□□□□ -0.05
SMIM11A-204ENST00000474455 IFITM1P13164 125 aa14.73□□□□□ -0.05
SMIM11A-204ENST00000474455 NTN5Q8WTR8 489 aaPredicted RBP14.73□□□□□ -0.05
SMIM11A-204ENST00000474455 OVOL2Q9BRP0 275 aa14.73□□□□□ -0.05
SMIM11A-204ENST00000474455 ICOSQ9Y6W8 199 aa14.73□□□□□ -0.05
SMIM11A-204ENST00000474455 H3BT86 120 aa14.72□□□□□ -0.05
SMIM11A-204ENST00000474455 TRIAP1O43715 76 aa14.72□□□□□ -0.05
SMIM11A-204ENST00000474455 Q6Q795 121 aa14.72□□□□□ -0.05
SMIM11A-204ENST00000474455 IL17DQ8TAD2 202 aa14.72□□□□□ -0.05
SMIM11A-204ENST00000474455 NOP10Q9NPE3 64 aaKnown RBP14.72□□□□□ -0.05
SMIM11A-204ENST00000474455 C16orf74Q96GX8 76 aa14.71□□□□□ -0.05
SMIM11A-204ENST00000474455 SNCGO76070 127 aa14.7□□□□□ -0.06
SMIM11A-204ENST00000474455 ANAPC13Q9BS18 74 aa14.7□□□□□ -0.06
SMIM11A-204ENST00000474455 UBE2D4Q9Y2X8 147 aa14.7□□□□□ -0.06
SMIM11A-204ENST00000474455 COL7A1Q02388 2944 aa14.7□□□□□ -0.06
SMIM11A-204ENST00000474455 TRAV8-4A0A0B4J246 113 aa14.69□□□□□ -0.06
SMIM11A-204ENST00000474455 PRSS2P07478 247 aa14.69□□□□□ -0.06
SMIM11A-204ENST00000474455 MRPL23Q16540 153 aaKnown RBP14.69□□□□□ -0.06
SMIM11A-204ENST00000474455 UBE2WQ96B02 151 aa14.69□□□□□ -0.06
SMIM11A-204ENST00000474455 CHCHD7Q9BUK0 85 aa14.69□□□□□ -0.06
SMIM11A-204ENST00000474455 TRAV8-3A0A0A6YYJ7 113 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 IGHV4-28A0A0C4DH34 117 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 GAGE2BQ13066 116 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 GAGE2EQ4V326 116 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 Q6ZTI0 123 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 Q8NAQ8 132 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 GAGE2DQ9UEU5 116 aa14.68□□□□□ -0.06
SMIM11A-204ENST00000474455 TIRAPP58753 221 aa14.67□□□□□ -0.06
SMIM11A-204ENST00000474455 TRGV1A0A0A0MS02 117 aa14.67□□□□□ -0.06
SMIM11A-204ENST00000474455 ADAMTSL4-AS1Q5T5F5 129 aa14.67□□□□□ -0.06
SMIM11A-204ENST00000474455 C2orf82Q6UX34 121 aa14.67□□□□□ -0.06
SMIM11A-204ENST00000474455 SMIM9A6NGZ8 99 aa14.66□□□□□ -0.06
SMIM11A-204ENST00000474455 MEGF8Q7Z7M0 2845 aa14.66□□□□□ -0.06
SMIM11A-204ENST00000474455 IGLV5-45A0A087WSX0 123 aa14.65□□□□□ -0.06
SMIM11A-204ENST00000474455 IGHV3-73A0A0B4J1V6 119 aa14.65□□□□□ -0.06
SMIM11A-204ENST00000474455 DAZ2Q13117 558 aaKnown RBP14.65□□□□□ -0.06
SMIM11A-204ENST00000474455 H7C423 109 aa14.64□□□□□ -0.07
SMIM11A-204ENST00000474455 LST1O00453 97 aa14.64□□□□□ -0.07
SMIM11A-204ENST00000474455 NDUFA1O15239 70 aa14.64□□□□□ -0.07
SMIM11A-204ENST00000474455 IGHV3-53P01767 116 aa14.64□□□□□ -0.07
SMIM11A-204ENST00000474455 FAM240AA0A1B0GVK7 77 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE7O76087 117 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE12FP0CL80 117 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE12GP0CL81 117 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE12IP0CL82 117 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 MIFP14174 115 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 CEMP1Q6PRD7 247 aaPredicted RBP14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 COPS9Q8WXC6 57 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 CELA1Q9UNI1 258 aa14.63□□□□□ -0.07
SMIM11A-204ENST00000474455 TEX49A0A1B0GTD5 131 aa14.62□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE5Q13069 117 aa14.62□□□□□ -0.07
SMIM11A-204ENST00000474455 GAGE6Q13070 117 aa14.62□□□□□ -0.07
SMIM11A-204ENST00000474455 CIRBPQ14011 172 aaKnown RBP14.62□□□□□ -0.07
SMIM11A-204ENST00000474455 TM2D3Q9BRN9 247 aa14.62□□□□□ -0.07
SMIM11A-204ENST00000474455 FAM222AQ5U5X8 452 aa14.61□□□□□ -0.07
SMIM11A-204ENST00000474455 RS1O15537 224 aa14.61□□□□□ -0.07
SMIM11A-204ENST00000474455 DEFB130BP0DP73 79 aa14.6□□□□□ -0.07
SMIM11A-204ENST00000474455 DEFB130AP0DP74 79 aa14.6□□□□□ -0.07
SMIM11A-204ENST00000474455 NDUFV3P56181 108 aaKnown RBP14.6□□□□□ -0.07
SMIM11A-204ENST00000474455 Q6ZSN1 163 aa14.6□□□□□ -0.07
SMIM11A-204ENST00000474455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 IGKV2-29A2NJV5 120 aaPredicted RBP14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 FAM19A3Q7Z5A8 133 aa14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 TRAV4A0A0B4J268 109 aa14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 RNASE13Q5GAN3 156 aaKnown RBP14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 TTC32Q5I0X7 151 aa14.59□□□□□ -0.07
SMIM11A-204ENST00000474455 C15orf53Q8NAA6 179 aa14.58□□□□□ -0.08
SMIM11A-204ENST00000474455 HERVK_113P63121 156 aa14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 IGLV5-39A0A0G2JS06 123 aa14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 NHLRC4P0CG21 123 aaPredicted RBP14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 TMEM101Q96IK0 257 aa14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 PPDPFQ9H3Y8 114 aa14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 CDKN2A-AS1Q9UH64 79 aa14.57□□□□□ -0.08
SMIM11A-204ENST00000474455 TRGV2A0A075B6R0 118 aa14.56□□□□□ -0.08
SMIM11A-204ENST00000474455 A0A0J9YWU9 116 aa14.56□□□□□ -0.08
SMIM11A-204ENST00000474455 DGAT2L7PQ6IED9 249 aa14.55□□□□□ -0.08
SMIM11A-204ENST00000474455 LINC00612Q8N6U2 182 aa14.55□□□□□ -0.08
SMIM11A-204ENST00000474455 SVIPQ8NHG7 77 aa14.55□□□□□ -0.08
SMIM11A-204ENST00000474455 Q9UF83 564 aa14.55□□□□□ -0.08
SMIM11A-204ENST00000474455 B9D2Q9BPU9 175 aa14.55□□□□□ -0.08
SMIM11A-204ENST00000474455 CLEC2BQ92478 149 aa14.54□□□□□ -0.08
SMIM11A-204ENST00000474455 LINC00308Q8TCZ7 52 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms