RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 A6NDX4 124 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 LINC00114Q6XXX2 140 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 Q8N9W7 124 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 FAM215AQ9Y5M1 114 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 TRAV21A0A0B4J279 112 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 CNBPP62633 177 aaKnown RBP2.26□□□□□ -2.05
UBR3-208ENST00000474426 NDPQ00604 133 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 DEFB113Q30KQ7 82 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 C15orf56Q8N910 161 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 UBALD1Q8TB05 177 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 Q9BRP9 147 aa2.26□□□□□ -2.05
UBR3-208ENST00000474426 ABCA1O95477 2261 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 MSMBP08118 114 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 LINC00167Q96N53 147 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 DPM3Q9P2X0 92 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 TRIOO75962 3097 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 IGLV4-69A0A075B6H9 119 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 BPY2O14599 106 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 ELOF1P60002 83 aaKnown RBP2.25□□□□□ -2.05
UBR3-208ENST00000474426 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 VPS13AQ96RL7 3174 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 A0A087WSZ3 146 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 KRTAP23-1A1A580 65 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 CCL22O00626 93 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 IGHV1-8P0DP01 117 aa2.25□□□□□ -2.05
UBR3-208ENST00000474426 K7ERS5 55 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 IGHV1-46P01743 117 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 UBL5Q9BZL1 73 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 SPAG17Q6Q759 2223 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 A0A087WW49 117 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 CHCHD7Q9BUK0 85 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 ORMDL1Q9P0S3 153 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 IGHV4OR15-8A0A075B7B6 117 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 GAS8-AS1O95177 125 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 TMEM14AQ9Y6G1 99 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 COL4A5P29400 1685 aa2.24□□□□□ -2.05
UBR3-208ENST00000474426 SMIM29Q86T20 159 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 IGHV3-66A0A0C4DH42 116 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 PPP1R17O96001 155 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.23□□□□□ -2.05
UBR3-208ENST00000474426 TMEM105Q8N8V8 129 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 SMIM14Q96QK8 99 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 IGKV3-20P01619 116 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 RPS27P42677 84 aaKnown RBP2.23□□□□□ -2.05
UBR3-208ENST00000474426 KNTC1P50748 2209 aa2.23□□□□□ -2.05
UBR3-208ENST00000474426 IGKV3D-15A0A087WSY6 115 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 NCR3O14931 201 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 P0C879 139 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 FAM74A4Q5TZK3 123 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 SPAG11BQ08648 103 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 SPAG11AQ6PDA7 123 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 WWC2-AS2Q96NR7 200 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 R4GMQ9 66 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 IGLV1-50A0A075B6I6 118 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 SPINK14Q6IE38 97 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 MIR7-3HGQ8N6C7 128 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 KPRPQ5T749 579 aaPredicted RBP2.22□□□□□ -2.05
UBR3-208ENST00000474426 LINC00208Q96KT6 92 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
UBR3-208ENST00000474426 MINOS1-NBL1R4GNA1 71 aa2.22□□□□□ -2.05
UBR3-208ENST00000474426 MED13LQ71F56 2210 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 TRBV10-1A0A0K0K1A3 114 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 PRAC2D3DTV9 90 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 C10orf25Q5T742 122 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 LINC00959A0A1B0GUT2 108 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 PANO1I0J062 215 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 CADP27708 2225 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 IGLV10-54A0A075B6I4 117 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 C2orf66Q6UXQ4 117 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 Q6YL49 198 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 Q6ZTI0 123 aa2.21□□□□□ -2.06
UBR3-208ENST00000474426 C9orf163Q8N9P6 203 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 IGHV1-18A0A0C4DH31 117 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 ODF3BA8MYP8 253 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 Q8NBF4 154 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 TRBV6-1A0A0K0K1D8 114 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 IGHV3-53P01767 116 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 PRB1P04280 392 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 PROK1P58294 105 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 KLK9Q9UKQ9 250 aa2.2□□□□□ -2.06
UBR3-208ENST00000474426 JMJD7-PLA2G4BH0Y9G9 81 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 PDE6GP18545 87 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 SLURP1P55000 103 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 IGKV3-7A0A075B6H7 116 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 CRIP1P50238 77 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 KRTAP15-1Q3LI76 137 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 Q86TA4 180 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 SPANXA2-OT1Q8N9U9 137 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 CNFNQ9BYD5 112 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 KRTAP4-8Q9BYQ9 185 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 UNC80Q8N2C7 3258 aa2.19□□□□□ -2.06
UBR3-208ENST00000474426 CACNA1CQ13936 2221 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms