RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 TRGV1A0A0A0MS02 117 aa15.18■□□□□ 0.02
RNF220-209ENST00000474064 I3L3M4 83 aa15.18■□□□□ 0.02
RNF220-209ENST00000474064 TRAV8-3A0A0A6YYJ7 113 aa15.17■□□□□ 0.02
RNF220-209ENST00000474064 SPATA3Q8NHX4 192 aa15.17■□□□□ 0.02
RNF220-209ENST00000474064 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
RNF220-209ENST00000474064 LINC00482Q8N8I6 264 aa15.17■□□□□ 0.02
RNF220-209ENST00000474064 TMEM101Q96IK0 257 aa15.17■□□□□ 0.02
RNF220-209ENST00000474064 LST1O00453 97 aa15.16■□□□□ 0.02
RNF220-209ENST00000474064 TIMM21Q9BVV7 248 aa15.16■□□□□ 0.02
RNF220-209ENST00000474064 C20orf203Q8NBC4 194 aa15.16■□□□□ 0.02
RNF220-209ENST00000474064 IGLV4-3A0A075B6K6 122 aa15.16■□□□□ 0.02
RNF220-209ENST00000474064 DEFB121Q5J5C9 76 aa15.16■□□□□ 0.02
RNF220-209ENST00000474064 CEMP1Q6PRD7 247 aaPredicted RBP15.16■□□□□ 0.02
RNF220-209ENST00000474064 IGHV3-53P01767 116 aa15.14■□□□□ 0.01
RNF220-209ENST00000474064 RHOHQ15669 191 aa15.14■□□□□ 0.01
RNF220-209ENST00000474064 PIK3CD-AS1Q5SR53 167 aa15.14■□□□□ 0.01
RNF220-209ENST00000474064 Q6ZTI0 123 aa15.14■□□□□ 0.01
RNF220-209ENST00000474064 IGHV3-38A0A0C4DH36 116 aa15.13■□□□□ 0.01
RNF220-209ENST00000474064 RS1O15537 224 aa15.13■□□□□ 0.01
RNF220-209ENST00000474064 NOP10Q9NPE3 64 aaKnown RBP15.13■□□□□ 0.01
RNF220-209ENST00000474064 ATRQ13535 2644 aa15.13■□□□□ 0.01
RNF220-209ENST00000474064 A8MZ25 164 aa15.12■□□□□ 0.01
RNF220-209ENST00000474064 LINC00694P0DN24 101 aa15.12■□□□□ 0.01
RNF220-209ENST00000474064 NDUFA12Q9UI09 145 aa15.12■□□□□ 0.01
RNF220-209ENST00000474064 EDA2RQ9HAV5 297 aa15.11■□□□□ 0.01
RNF220-209ENST00000474064 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.11■□□□□ 0.01
RNF220-209ENST00000474064 MIAQ16674 131 aa15.1■□□□□ 0.01
RNF220-209ENST00000474064 IL17DQ8TAD2 202 aa15.1■□□□□ 0.01
RNF220-209ENST00000474064 SPANXDQ9BXN6 97 aa15.1■□□□□ 0.01
RNF220-209ENST00000474064 SPANXCQ9NY87 97 aa15.1■□□□□ 0.01
RNF220-209ENST00000474064 C9orf153Q5TBE3 101 aa15.1■□□□□ 0.01
RNF220-209ENST00000474064 RNASE13Q5GAN3 156 aaKnown RBP15.09■□□□□ 0.01
RNF220-209ENST00000474064 IGHV1-58A0A0C4DH39 117 aa15.08■□□□□ 0
RNF220-209ENST00000474064 DAND5Q8N907 189 aa15.08■□□□□ 0
RNF220-209ENST00000474064 IMUPQ9GZP8 106 aa15.08■□□□□ 0
RNF220-209ENST00000474064 SMCR5Q8TEV8 140 aa15.08■□□□□ 0
RNF220-209ENST00000474064 F8P00451 2351 aa15.07■□□□□ 0
RNF220-209ENST00000474064 CSNK1G2-AS1Q8NCQ2 148 aa15.07■□□□□ 0
RNF220-209ENST00000474064 MRPS36P82909 103 aaKnown RBP15.06■□□□□ 0
RNF220-209ENST00000474064 C3orf22Q8N5N4 141 aa15.06■□□□□ 0
RNF220-209ENST00000474064 TRRAPQ9Y4A5 3859 aa15.06■□□□□ 0
RNF220-209ENST00000474064 LOC107984640A0A0U1RRK4 108 aa15.06■□□□□ 0
RNF220-209ENST00000474064 FAM104AQ969W3 186 aa15.06■□□□□ 0
RNF220-209ENST00000474064 TEP1Q99973 2627 aaKnown RBP15.05■□□□□ -0
RNF220-209ENST00000474064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.05■□□□□ -0
RNF220-209ENST00000474064 IGKV2-29A2NJV5 120 aaPredicted RBP15.05■□□□□ -0
RNF220-209ENST00000474064 PLAC8L1A1L4L8 177 aa15.04■□□□□ -0
RNF220-209ENST00000474064 ACYP1P07311 99 aa15.04■□□□□ -0
RNF220-209ENST00000474064 C16orf74Q96GX8 76 aa15.04■□□□□ -0
RNF220-209ENST00000474064 DNAJC30Q96LL9 226 aa15.04■□□□□ -0
RNF220-209ENST00000474064 VSIG2Q96IQ7 327 aa15.04■□□□□ -0
RNF220-209ENST00000474064 KLK5Q9Y337 293 aaPredicted RBP15.03■□□□□ -0
RNF220-209ENST00000474064 TRGV2A0A075B6R0 118 aa15.03■□□□□ -0
RNF220-209ENST00000474064 NBEAL2Q6ZNJ1 2754 aa15.02■□□□□ -0
RNF220-209ENST00000474064 HERVK_113P63121 156 aa15.02■□□□□ -0
RNF220-209ENST00000474064 CHCHD7Q9BUK0 85 aa15.02■□□□□ -0
RNF220-209ENST00000474064 UQCRQO14949 82 aa15.02□□□□□ -0.01
RNF220-209ENST00000474064 CSDC2Q9Y534 153 aaKnown RBP15.02□□□□□ -0.01
RNF220-209ENST00000474064 DAZ2Q13117 558 aaKnown RBP15.01□□□□□ -0.01
RNF220-209ENST00000474064 LINC00643Q86TS7 51 aa15.01□□□□□ -0.01
RNF220-209ENST00000474064 C9orf66Q5T8R8 295 aa15.01□□□□□ -0.01
RNF220-209ENST00000474064 PYGO1Q9Y3Y4 419 aa15□□□□□ -0.01
RNF220-209ENST00000474064 K7EQD1 137 aa14.99□□□□□ -0.01
RNF220-209ENST00000474064 LINC00526Q96FQ7 95 aa14.99□□□□□ -0.01
RNF220-209ENST00000474064 DAZ4Q86SG3 579 aaKnown RBP14.97□□□□□ -0.01
RNF220-209ENST00000474064 DAZ3Q9NR90 486 aaKnown RBP14.97□□□□□ -0.01
RNF220-209ENST00000474064 RPL36AP83881 106 aaKnown RBP14.96□□□□□ -0.01
RNF220-209ENST00000474064 RPL36ALQ969Q0 106 aaKnown RBP14.96□□□□□ -0.01
RNF220-209ENST00000474064 UBE2D4Q9Y2X8 147 aa14.96□□□□□ -0.01
RNF220-209ENST00000474064 TINCRA0A1B0GVN0 87 aa14.95□□□□□ -0.02
RNF220-209ENST00000474064 LOC100131303A0A0U1RQF7 123 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 A0A0U1RRA0 63 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 COX7A2LO14548 114 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 DEFB130BP0DP73 79 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 DEFB130AP0DP74 79 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 OVOL2Q9BRP0 275 aa14.94□□□□□ -0.02
RNF220-209ENST00000474064 TRGV4A0A0C4DH28 118 aa14.93□□□□□ -0.02
RNF220-209ENST00000474064 TIMM17BO60830 172 aa14.92□□□□□ -0.02
RNF220-209ENST00000474064 FAM19A5Q7Z5A7 132 aaPredicted RBP14.92□□□□□ -0.02
RNF220-209ENST00000474064 TRBV10-1A0A0K0K1A3 114 aa14.92□□□□□ -0.02
RNF220-209ENST00000474064 ZNF625Q96I27 306 aaPredicted RBP14.92□□□□□ -0.02
RNF220-209ENST00000474064 CDKN2A-AS1Q9UH64 79 aa14.92□□□□□ -0.02
RNF220-209ENST00000474064 ATP5G1P05496 136 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 COX7CP15954 63 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 SDIM1Q6ZPB5 146 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 J3KT08 172 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 BAALC-AS2P0C853 105 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 C5orf38Q86SI9 138 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 LINC00308Q8TCZ7 52 aa14.91□□□□□ -0.02
RNF220-209ENST00000474064 DGAT2L7PQ6IED9 249 aa14.9□□□□□ -0.02
RNF220-209ENST00000474064 NTM-AS1Q6ZSK4 140 aa14.9□□□□□ -0.02
RNF220-209ENST00000474064 TIRAPP58753 221 aa14.89□□□□□ -0.03
RNF220-209ENST00000474064 CIRBPQ14011 172 aaKnown RBP14.89□□□□□ -0.03
RNF220-209ENST00000474064 C5orf47Q569G3 176 aa14.89□□□□□ -0.03
RNF220-209ENST00000474064 DEFB135Q30KP9 77 aa14.88□□□□□ -0.03
RNF220-209ENST00000474064 NDUFA1O15239 70 aa14.88□□□□□ -0.03
RNF220-209ENST00000474064 GAGE2AQ6NT46 116 aa14.88□□□□□ -0.03
RNF220-209ENST00000474064 C2orf48Q96LS8 159 aa14.88□□□□□ -0.03
RNF220-209ENST00000474064 X6R8D5 127 aa14.88□□□□□ -0.03
RNF220-209ENST00000474064 CXCL5P42830 114 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms