RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 F2Z2F3 143 aa4.38□□□□□ -1.71
NUP35-208ENST00000472844 GTF3C1Q12789 2109 aa4.38□□□□□ -1.71
NUP35-208ENST00000472844 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
NUP35-208ENST00000472844 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
NUP35-208ENST00000472844 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
NUP35-208ENST00000472844 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
NUP35-208ENST00000472844 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
NUP35-208ENST00000472844 TRAV13-2A0A0B4J235 113 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 BCE1O60756 84 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 IL4P05112 153 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 DSCR4P56555 118 aaPredicted RBP4.37□□□□□ -1.71
NUP35-208ENST00000472844 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
NUP35-208ENST00000472844 DPTQ07507 201 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 SPANXN5Q5MJ07 72 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 C9orf106Q8NAJ2 232 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 SPTSSBQ8NFR3 76 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 IMMP1LQ96LU5 166 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 RNF5Q99942 180 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 ZGRF1Q86YA3 2104 aa4.37□□□□□ -1.71
NUP35-208ENST00000472844 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
NUP35-208ENST00000472844 MYO7BQ6PIF6 2116 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 MED12LQ86YW9 2145 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 IGKV1D-42A0A075B6H8 117 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 IGHV1-18A0A0C4DH31 117 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 MDC1Q14676 2089 aaKnown RBP4.36□□□□□ -1.71
NUP35-208ENST00000472844 MUC4Q99102 2169 aa4.36□□□□□ -1.71
NUP35-208ENST00000472844 CNTRLQ7Z7A1 2325 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 E7EUB6 86 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 PANO1I0J062 215 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 Q6ZR03 302 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 TYMSOSQ8TAI1 123 aa4.35□□□□□ -1.71
NUP35-208ENST00000472844 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
NUP35-208ENST00000472844 A0A087WSZ3 146 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 FAM168BA1KXE4 195 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 HOXB6P17509 224 aaKnown RBP4.34□□□□□ -1.71
NUP35-208ENST00000472844 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 ZNF826PQ6ZT77 177 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 TMEM254Q8TBM7 123 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
NUP35-208ENST00000472844 UNC13CQ8NB66 2214 aa4.34□□□□□ -1.72
NUP35-208ENST00000472844 AKAP6Q13023 2319 aa4.34□□□□□ -1.72
NUP35-208ENST00000472844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.34□□□□□ -1.72
NUP35-208ENST00000472844 MXRA5Q9NR99 2828 aa4.34□□□□□ -1.72
NUP35-208ENST00000472844 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
NUP35-208ENST00000472844 TRBV7-1A0A0A6YYK4 115 aa4.33□□□□□ -1.72
NUP35-208ENST00000472844 SMR3AQ99954 134 aa4.33□□□□□ -1.72
NUP35-208ENST00000472844 MANBALQ9NQG1 85 aa4.33□□□□□ -1.72
NUP35-208ENST00000472844 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
NUP35-208ENST00000472844 CACNA1CQ13936 2221 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 IGLV10-54A0A075B6I4 117 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 A0A096LNJ9 63 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 TRBV6-6A0A0A6YYG2 114 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 A0A0G2JND7 137 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 H7BZZ5 65 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 IGLV3-21P80748 117 aaPredicted RBP4.32□□□□□ -1.72
NUP35-208ENST00000472844 ZNF79Q15937 498 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 Q5W150 140 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 Q6ZR54 194 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 CYB561D1Q8N8Q1 229 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
NUP35-208ENST00000472844 AGRNO00468 2067 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 IGLV1-47P01700 117 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 CFC1P0CG37 223 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 PRB4P10163 310 aaPredicted RBP4.31□□□□□ -1.72
NUP35-208ENST00000472844 EFNA4P52798 201 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
NUP35-208ENST00000472844 IGHV3-64A0A075B6Q5 118 aa4.3□□□□□ -1.72
NUP35-208ENST00000472844 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
NUP35-208ENST00000472844 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
NUP35-208ENST00000472844 ZCCHC23Q6ZST2 131 aa4.3□□□□□ -1.72
NUP35-208ENST00000472844 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
NUP35-208ENST00000472844 TRAV10A0A0B4J240 114 aa4.29□□□□□ -1.72
NUP35-208ENST00000472844 A0A0J9YWU9 116 aa4.29□□□□□ -1.72
NUP35-208ENST00000472844 MIFP14174 115 aa4.29□□□□□ -1.72
NUP35-208ENST00000472844 COX6B1P14854 86 aa4.29□□□□□ -1.72
NUP35-208ENST00000472844 VMO1Q7Z5L0 202 aa4.29□□□□□ -1.72
NUP35-208ENST00000472844 ZNF56Q15929 161 aa4.28□□□□□ -1.72
NUP35-208ENST00000472844 DEFB109BQ30KR1 87 aa4.28□□□□□ -1.72
NUP35-208ENST00000472844 Q8NAQ8 132 aa4.28□□□□□ -1.72
NUP35-208ENST00000472844 FAM167A-AS1Q96KT0 104 aa4.28□□□□□ -1.72
NUP35-208ENST00000472844 U3KQA8 63 aa4.28□□□□□ -1.72
NUP35-208ENST00000472844 TRRAPQ9Y4A5 3859 aa4.27□□□□□ -1.73
NUP35-208ENST00000472844 MEGF8Q7Z7M0 2845 aa4.27□□□□□ -1.73
NUP35-208ENST00000472844 RYR1P21817 5038 aa4.27□□□□□ -1.73
NUP35-208ENST00000472844 CPAMD8Q8IZJ3 1885 aa4.27□□□□□ -1.73
NUP35-208ENST00000472844 A0A1B0GU33 70 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms