RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
XRN1-210ENST00000472697 TAS2R8Q9NYW2 309 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 KAAG1Q9UBP8 84 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 HLA-DRB4X5D2U9 266 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 F6UZH7 168 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 UQCRQO14949 82 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 TRACP01848 142 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 RBP4P02753 201 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 TEX261Q6UWH6 196 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 DPH3Q96FX2 82 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 YPEL2Q96QA6 119 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.28□□□□□ -2.2
XRN1-210ENST00000472697 LYNX1G3V0Z9 82 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 LY6G6CO95867 125 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 LYNX1P0DP58 116 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 NFYAP23511 347 aaPredicted RBP1.28□□□□□ -2.2
XRN1-210ENST00000472697 Q1T7F1 81 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 SPRNQ5BIV9 151 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 FOXI2Q6ZQN5 318 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 PDCD10Q9BUL8 212 aa1.28□□□□□ -2.2
XRN1-210ENST00000472697 DMBT1Q9UGM3 2413 aaPredicted RBP1.28□□□□□ -2.21
XRN1-210ENST00000472697 KMT2AQ03164 3969 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 IGKV2-24A0A0C4DH68 120 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 CCL8P80075 99 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 HCP5Q6MZN7 132 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 C10orf111Q8N326 155 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 PRO0461Q9UI25 63 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 PSORS1C2Q9UIG4 136 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 DNAH10Q8IVF4 4471 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 TRBV6-8A0A0A6YYG3 113 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 OOSP1A8MZH6 123 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 H3BUX3 64 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 J3QR89 54 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 CKS2P33552 79 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 KRTAP6-3Q3LI67 103 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 KRTAP13-3Q3SY46 172 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 MINOS1Q5TGZ0 78 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 COMMD6Q7Z4G1 85 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 SBSPONQ8IVN8 264 aa1.27□□□□□ -2.21
XRN1-210ENST00000472697 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 CORTO00230 105 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 EDF1O60869 148 aaKnown RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 SMIM24O75264 130 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 SNAPC5O75971 98 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 IGKV1-17P01599 117 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 TPT1P13693 172 aaKnown RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 QRFPP83859 136 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 PABPC1L2AQ5JQF8 200 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 Q6ZUT4 128 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 VMO1Q7Z5L0 202 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 C10orf126Q8N4M7 172 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 MAGOHBQ96A72 148 aaKnown RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 SLC35B3Q9H1N7 401 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 NDUFB11Q9NX14 153 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 PLECQ15149 4684 aaKnown RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 TRGV4A0A0C4DH28 118 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 hDV103S1A0JD37 113 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 C7orf71A4D174 169 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 H3BRN7 92 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 IFNGP01579 166 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 IL7P13232 177 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 CAV3P56539 151 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 HAGHLQ6PII5 290 aaPredicted RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 OR5AS1Q8N127 324 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 TVP23CQ96ET8 276 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 CST9LQ9H4G1 147 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 LY96Q9Y6Y9 160 aa1.26□□□□□ -2.21
XRN1-210ENST00000472697 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
XRN1-210ENST00000472697 TRAV10A0A0B4J240 114 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 IFNA4P05014 189 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 S100PP25815 95 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 BRS3P32247 399 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 KRTAP10-10P60014 251 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 SELENOWP63302 87 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.25□□□□□ -2.21
XRN1-210ENST00000472697 ZNF563Q8TA94 476 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 SPANXA1Q9NS26 97 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 COA4Q9NYJ1 87 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 HUWE1Q7Z6Z7 4374 aaKnown RBP1.25□□□□□ -2.21
XRN1-210ENST00000472697 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
XRN1-210ENST00000472697 FAT2Q9NYQ8 4349 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 IGHV1-24A0A0C4DH33 117 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 IQCF6A8MYZ5 107 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 CCL25O15444 150 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 NDUFA5Q16718 116 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 C10orf128Q5T292 105 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 SFT2D1Q8WV19 159 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 DSCR8Q96T75 97 aa1.25□□□□□ -2.21
XRN1-210ENST00000472697 IGKV1D-17A0A075B6S4 117 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 SPRR5A0A1B0GTR4 108 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 RNASE3P12724 160 aaKnown RBP1.24□□□□□ -2.21
XRN1-210ENST00000472697 MRPS36P82909 103 aaKnown RBP1.24□□□□□ -2.21
XRN1-210ENST00000472697 CATR1Q13166 79 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 C5orf17Q8NAS9 161 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 OR5AK2Q8NH90 309 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 SOX21Q9Y651 276 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms