RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 VSIG2Q96IQ7 327 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 TRBV6-8A0A0A6YYG3 113 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 IGHV4-28A0A0C4DH34 117 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 LOC107984156A0A0G2JMH3 177 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 SMIM9A6NGZ8 99 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 H7C2G1 150 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 KRTAP24-1Q3LI83 254 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 ARL17AQ8IVW1 177 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 C3orf56Q8N813 242 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 ATP6V0E2Q8NHE4 81 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 GTSF1LQ9H1H1 148 aa3.42□□□□□ -1.86
TM4SF1-202ENST00000472441 IGLV4-60A0A075B6I1 120 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 A4D1N5 150 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 PAX4O43316 350 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 TIRAPP58753 221 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 DAD1P61803 113 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 HERVK_113P63121 156 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 SMAGPQ0VAQ4 97 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 WFDC9Q8NEX5 89 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 TMEM238C9JI98 176 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 CFC1BP0CG36 223 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 CFC1P0CG37 223 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 DAND5Q8N907 189 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 PRO0255Q9UI72 69 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 CSDC2Q9Y534 153 aaKnown RBP3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 F5H768 121 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 H3BMG7 143 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 MRAPQ8TCY5 172 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 CELA1Q9UNI1 258 aa3.41□□□□□ -1.86
TM4SF1-202ENST00000472441 A0A1B0GWB2 263 aa3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 LYRM9A8MSI8 78 aa3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 RNF151Q2KHN1 245 aa3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 CLPSL2Q6UWE3 100 aa3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 Q9H8V8 135 aa3.4□□□□□ -1.86
TM4SF1-202ENST00000472441 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.87
TM4SF1-202ENST00000472441 TSPAN13O95857 204 aa3.4□□□□□ -1.87
TM4SF1-202ENST00000472441 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
TM4SF1-202ENST00000472441 ZFAND6Q6FIF0 208 aa3.4□□□□□ -1.87
TM4SF1-202ENST00000472441 LINC00612Q8N6U2 182 aa3.4□□□□□ -1.87
TM4SF1-202ENST00000472441 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 SMIM1B2RUZ4 78 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 PSMB2P49721 201 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 Q1RN00 199 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 RETNQ9HD89 108 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 IGLV5-45A0A087WSX0 123 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 H7C423 109 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 ATP5G1P05496 136 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 MIFP14174 115 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 MEIG1Q5JSS6 88 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 PRIMA1Q86XR5 153 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 Q8NAQ8 132 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 RNF183Q96D59 192 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 CIRBPQ14011 172 aaKnown RBP3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 LITAFQ99732 161 aa3.39□□□□□ -1.87
TM4SF1-202ENST00000472441 NDUFA1O15239 70 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 EIF4EBP3O60516 100 aaPredicted RBP3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 XCL1P47992 114 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 RBX1P62877 108 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 WFDC2Q14508 124 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 C11orf68Q9H3H3 251 aaKnown RBP3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 IGLV5-39A0A0G2JS06 123 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 MIAQ16674 131 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 Q8N3U1 123 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
TM4SF1-202ENST00000472441 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SPANXDQ9BXN6 97 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 G3V4G9 280 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 WIPF1O43516 503 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 ANGP03950 147 aaKnown RBP3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SH2D6Q7Z4S9 175 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 TCL1BO95988 128 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SS18Q15532 418 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 ETDBQ3ZM63 59 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 SHISA2Q6UWI4 295 aa3.37□□□□□ -1.87
TM4SF1-202ENST00000472441 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 A0A0B4J2C4 111 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 F8W1H4 67 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 K7ERU9 68 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms