RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 VAMP8Q9BV40 100 aa1.11□□□□□ -2.23
SMC5-202ENST00000471372 SPINK6Q6UWN8 80 aa1.1□□□□□ -2.23
SMC5-202ENST00000471372 MLH3Q9UHC1 1453 aa1.1□□□□□ -2.23
SMC5-202ENST00000471372 H7BZZ5 65 aa1.09□□□□□ -2.23
SMC5-202ENST00000471372 ASIPP42127 132 aa1.09□□□□□ -2.23
SMC5-202ENST00000471372 C10orf113Q5VZT2 155 aa1.09□□□□□ -2.23
SMC5-202ENST00000471372 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
SMC5-202ENST00000471372 AKAP12Q02952 1782 aa1.08□□□□□ -2.24
SMC5-202ENST00000471372 SERP2Q8N6R1 65 aa1.08□□□□□ -2.24
SMC5-202ENST00000471372 PRO0255Q9UI72 69 aa1.08□□□□□ -2.24
SMC5-202ENST00000471372 S100A3P33764 101 aa1.07□□□□□ -2.24
SMC5-202ENST00000471372 ANKRD26Q9UPS8 1709 aa1.06□□□□□ -2.24
SMC5-202ENST00000471372 TRGV9Q99603 122 aa1.06□□□□□ -2.24
SMC5-202ENST00000471372 FAM208BQ5VWN6 2430 aa1.06□□□□□ -2.24
SMC5-202ENST00000471372 MAGI1Q96QZ7 1491 aaPredicted RBP1.05□□□□□ -2.24
SMC5-202ENST00000471372 FAUP35544 74 aaKnown RBP1.05□□□□□ -2.24
SMC5-202ENST00000471372 SPCS1Q9Y6A9 102 aa1.05□□□□□ -2.24
SMC5-202ENST00000471372 MYO7BQ6PIF6 2116 aa1.04□□□□□ -2.24
SMC5-202ENST00000471372 TRBV25-1A0A075B6N4 114 aa1.04□□□□□ -2.24
SMC5-202ENST00000471372 PMCHL1Q16048 86 aa1.04□□□□□ -2.24
SMC5-202ENST00000471372 LCN9Q8WX39 176 aa1.04□□□□□ -2.24
SMC5-202ENST00000471372 POLQO75417 2590 aa1.04□□□□□ -2.24
SMC5-202ENST00000471372 TNCP24821 2201 aa1.03□□□□□ -2.24
SMC5-202ENST00000471372 C7orf77A4D0Y5 90 aa1.03□□□□□ -2.24
SMC5-202ENST00000471372 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
SMC5-202ENST00000471372 FDCSPQ8NFU4 85 aa1.03□□□□□ -2.24
SMC5-202ENST00000471372 CACNA1CQ13936 2221 aa1.03□□□□□ -2.25
SMC5-202ENST00000471372 A0A087WVE0 104 aa1.02□□□□□ -2.25
SMC5-202ENST00000471372 ARHGEF12Q9NZN5 1544 aa1.02□□□□□ -2.25
SMC5-202ENST00000471372 ZFHX3Q15911 3703 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 ABCA12Q86UK0 2595 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 TRBV7-7A0A0K0K1E9 115 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 SYS1-DBNDD2H3BUS1 97 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 UQCRHP07919 91 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 PSMG4Q5JS54 123 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 LINC01600Q96MT4 127 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 PRO1933Q9H354 126 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
SMC5-202ENST00000471372 PLEKHH2Q8IVE3 1493 aa1□□□□□ -2.25
SMC5-202ENST00000471372 I3L2K1 104 aa1□□□□□ -2.25
SMC5-202ENST00000471372 LINC00846Q9NV44 126 aa1□□□□□ -2.25
SMC5-202ENST00000471372 C1orf167Q5SNV9 1468 aa0.99□□□□□ -2.25
SMC5-202ENST00000471372 PDCD11Q14690 1871 aaKnown RBP0.99□□□□□ -2.25
SMC5-202ENST00000471372 TRBV6-1A0A0K0K1D8 114 aa0.99□□□□□ -2.25
SMC5-202ENST00000471372 SMARCA2P51531 1590 aa0.99□□□□□ -2.25
SMC5-202ENST00000471372 CACNA1EQ15878 2313 aa0.99□□□□□ -2.25
SMC5-202ENST00000471372 NUP188Q5SRE5 1749 aa0.98□□□□□ -2.25
SMC5-202ENST00000471372 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
SMC5-202ENST00000471372 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
SMC5-202ENST00000471372 NRXN1Q9ULB1 1477 aa0.98□□□□□ -2.25
SMC5-202ENST00000471372 MARF1Q9Y4F3 1742 aaKnown RBP0.97□□□□□ -2.25
SMC5-202ENST00000471372 TPRP12270 2363 aaKnown RBP0.97□□□□□ -2.25
SMC5-202ENST00000471372 RAPGEF2Q9Y4G8 1499 aa0.96□□□□□ -2.26
SMC5-202ENST00000471372 F8P00451 2351 aa0.96□□□□□ -2.26
SMC5-202ENST00000471372 POLA1P09884 1462 aaPredicted RBP0.95□□□□□ -2.26
SMC5-202ENST00000471372 UQCRHLA0A096LP55 91 aa0.95□□□□□ -2.26
SMC5-202ENST00000471372 Q8IZM0 81 aa0.95□□□□□ -2.26
SMC5-202ENST00000471372 NLRP1Q9C000 1473 aa0.94□□□□□ -2.26
SMC5-202ENST00000471372 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
SMC5-202ENST00000471372 Q9H521 79 aa0.94□□□□□ -2.26
SMC5-202ENST00000471372 TROQ12816 1431 aaPredicted RBP0.94□□□□□ -2.26
SMC5-202ENST00000471372 BIVM-ERCC5R4GMW8 1640 aa0.93□□□□□ -2.26
SMC5-202ENST00000471372 AHCTF1Q8WYP5 2266 aa0.93□□□□□ -2.26
SMC5-202ENST00000471372 Q5BKY6 102 aa0.93□□□□□ -2.26
SMC5-202ENST00000471372 PAPPAQ13219 1627 aa0.93□□□□□ -2.26
SMC5-202ENST00000471372 TTC37Q6PGP7 1564 aa0.92□□□□□ -2.26
SMC5-202ENST00000471372 ANK2Q01484 3957 aa0.92□□□□□ -2.26
SMC5-202ENST00000471372 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
SMC5-202ENST00000471372 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
SMC5-202ENST00000471372 LINC00959A0A1B0GUT2 108 aa0.91□□□□□ -2.26
SMC5-202ENST00000471372 PIGYQ3MUY2 71 aa0.91□□□□□ -2.26
SMC5-202ENST00000471372 FXYD6-FXYD2A0A087WZ82 144 aa0.9□□□□□ -2.27
SMC5-202ENST00000471372 DEFB107AQ8IZN7 70 aa0.9□□□□□ -2.27
SMC5-202ENST00000471372 C20orf78Q9BR46 151 aa0.9□□□□□ -2.27
SMC5-202ENST00000471372 BAZ1AQ9NRL2 1556 aaPredicted RBP0.89□□□□□ -2.27
SMC5-202ENST00000471372 ARMS2P0C7Q2 107 aa0.89□□□□□ -2.27
SMC5-202ENST00000471372 HIGD1BQ9P298 99 aa0.89□□□□□ -2.27
SMC5-202ENST00000471372 V9GYS6 101 aa0.89□□□□□ -2.27
SMC5-202ENST00000471372 TULP4Q9NRJ4 1543 aa0.89□□□□□ -2.27
SMC5-202ENST00000471372 TRBV7-4A0A0J9YYF1 115 aa0.88□□□□□ -2.27
SMC5-202ENST00000471372 GYPAP02724 150 aa0.88□□□□□ -2.27
SMC5-202ENST00000471372 KNDC1Q76NI1 1749 aa0.87□□□□□ -2.27
SMC5-202ENST00000471372 H3BQF6 201 aa0.87□□□□□ -2.27
SMC5-202ENST00000471372 CHD9Q3L8U1 2897 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 MON2Q7Z3U7 1717 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 SPTBN2O15020 2390 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 PLCE1Q9P212 2302 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 CLTCQ00610 1675 aaKnown RBP0.86□□□□□ -2.27
SMC5-202ENST00000471372 F8WEM9 126 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 ETDBQ3ZM63 59 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 PSENENQ9NZ42 101 aa0.86□□□□□ -2.27
SMC5-202ENST00000471372 XRN1Q8IZH2 1706 aaKnown RBP0.86□□□□□ -2.27
SMC5-202ENST00000471372 SPINK1P00995 79 aa0.85□□□□□ -2.27
SMC5-202ENST00000471372 C2CD3Q4AC94 2353 aa0.85□□□□□ -2.27
SMC5-202ENST00000471372 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
SMC5-202ENST00000471372 USP24Q9UPU5 2620 aa0.84□□□□□ -2.27
SMC5-202ENST00000471372 H0Y9P7 68 aa0.84□□□□□ -2.27
SMC5-202ENST00000471372 ZNF720Q7Z2F6 126 aa0.84□□□□□ -2.27
SMC5-202ENST00000471372 A0A1B0GU69 56 aa0.83□□□□□ -2.28
SMC5-202ENST00000471372 CFDP00746 253 aaPredicted RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms