RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 LYRM2Q9NU23 88 aaPredicted RBP0.86□□□□□ -2.27
CLIP4-209ENST00000471165 EXTL2Q9UBQ6 330 aa0.86□□□□□ -2.27
CLIP4-209ENST00000471165 TRDV1A0A1B0GX56 115 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 FABP5P3A8MUU1 101 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 ZNF727A8MUV8 499 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 A8MWP4 228 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 C1orf196B1AJZ1 125 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 K7EQM0 130 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 M0QY20 66 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 CIB2O75838 187 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 UPK1BO75841 260 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 SDC2P34741 201 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 TGFBR1P36897 503 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 RPL29P47914 159 aaKnown RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 TMBIM6P55061 237 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 NCS1P62166 190 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 FLI1Q01543 452 aaPredicted RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 BAXQ07812 192 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 MLLT11Q13015 90 aaPredicted RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 RNASE13Q5GAN3 156 aaKnown RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 FAM74A1Q5RGS3 127 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 SPANXN1Q5VSR9 72 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 Q5VV11 94 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 C1orf146Q5VVC0 180 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 FAM231DQ6ZW35 169 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 SSBP3-AS1Q7Z2R9 100 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 LINC01551Q86U37 167 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 SAMD12Q8N8I0 201 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 DEDD2Q8WXF8 326 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 ALKBH7Q9BT30 221 aaPredicted RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 GNB1LQ9BYB4 327 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 MED28Q9H204 178 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 MBD2Q9UBB5 411 aa0.85□□□□□ -2.27
CLIP4-209ENST00000471165 ZNF706Q9Y5V0 76 aaPredicted RBP0.85□□□□□ -2.27
CLIP4-209ENST00000471165 A0A0G2JQZ4 141 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 UBE2L5PA0A1B0GUS4 154 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 F8WDY8 70 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 SH2D1AO60880 128 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 RAB3DO95716 219 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 APCSP02743 223 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 GNAO1P09471 354 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 ANXA3P12429 323 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 ZNF25P17030 456 aaPredicted RBP0.84□□□□□ -2.27
CLIP4-209ENST00000471165 CRIP1P50238 77 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 FOXA3P55318 350 aaPredicted RBP0.84□□□□□ -2.27
CLIP4-209ENST00000471165 DEFA1P59665 94 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 RBM3P98179 157 aaKnown RBP0.84□□□□□ -2.27
CLIP4-209ENST00000471165 DNAL1Q4LDG9 190 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 UBE2NLQ5JXB2 153 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 SAPCD1Q5SSQ6 148 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 DNLZQ5SXM8 178 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 C9orf153Q5TBE3 101 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 RASL11AQ6T310 242 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 TMEM14EPQ6UXP3 125 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 FAM19A3Q7Z5A8 133 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 NKAPP1Q8N9T2 125 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 SMIM8Q96KF7 97 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 LIMD2Q9BT23 127 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 C9orf16Q9BUW7 83 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 GGACTQ9BVM4 153 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 TMEM126AQ9H061 195 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 GEMIN7Q9H840 131 aaKnown RBP0.84□□□□□ -2.27
CLIP4-209ENST00000471165 NIT2Q9NQR4 276 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 CDC42SE2Q9NRR3 84 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 MED9Q9NWA0 146 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 TMEM242Q9NWH2 141 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 TXNL4BQ9NX01 149 aaKnown RBP0.84□□□□□ -2.27
CLIP4-209ENST00000471165 NDUFB11Q9NX14 153 aa0.84□□□□□ -2.27
CLIP4-209ENST00000471165 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
CLIP4-209ENST00000471165 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.28
CLIP4-209ENST00000471165 LOC107984156A0A0G2JMH3 177 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 SMIM31A0A1B0GVY4 71 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 DISC1C4P0D8 188 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 H7C2G1 150 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 L7N2F9 121 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 M0R378 163 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 SLC25A6P12236 298 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 BCAP31P51572 246 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 KIAA0087Q14695 138 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 ARL17AQ8IVW1 177 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 C8orf59Q8N0T1 100 aaPredicted RBP0.83□□□□□ -2.28
CLIP4-209ENST00000471165 SMCR5Q8TEV8 140 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 AP1S3Q96PC3 154 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 FUNDC2Q9BWH2 189 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 GSKIPQ9P0R6 139 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 RBM12B-AS1Q9P1G2 102 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 RSL24D1Q9UHA3 163 aaKnown RBP0.83□□□□□ -2.28
CLIP4-209ENST00000471165 WDR83OSQ9Y284 106 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 ARL2-SNX15V9GYD0 113 aa0.83□□□□□ -2.28
CLIP4-209ENST00000471165 C7orf66A4D0T2 115 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 RAB19A4D1S5 217 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 CTDSP2O14595 271 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 HMGB3O15347 200 aaKnown RBP0.82□□□□□ -2.28
CLIP4-209ENST00000471165 HRES1P13985 223 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 PMCHP20382 165 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 TAS2R30P59541 319 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 CKS1BP61024 79 aa0.82□□□□□ -2.28
CLIP4-209ENST00000471165 KHDC3LQ587J8 217 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms