RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 IGLV4-3A0A075B6K6 122 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 IFITM10A6NMD0 228 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 RBX1P62877 108 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 MPV17L2Q567V2 206 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 MAP1LC3CQ9BXW4 147 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
SF3A1-206ENST00000471037 KRTAP29-1A8MX34 341 aaPredicted RBP6.01□□□□□ -1.45
SF3A1-206ENST00000471037 Q6ZSA8 131 aa6.01□□□□□ -1.45
SF3A1-206ENST00000471037 Q6ZUT4 128 aa6.01□□□□□ -1.45
SF3A1-206ENST00000471037 LINC00173Q6ZV60 143 aa6.01□□□□□ -1.45
SF3A1-206ENST00000471037 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
SF3A1-206ENST00000471037 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
SF3A1-206ENST00000471037 PRSS1P07477 247 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 TEX43Q6ZNM6 134 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 ZNF664Q8N3J9 261 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 Q8N976 141 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 BAALCQ8WXS3 180 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 FAM104AQ969W3 186 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 C2orf88Q9BSF0 95 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 VCX2Q9H322 139 aa6□□□□□ -1.45
SF3A1-206ENST00000471037 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 IGHV3-30P01768 117 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 IGHV3-33P01772 117 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
SF3A1-206ENST00000471037 IGHV3-30-3P0DP02 117 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 IGHV3-30-5P0DP03 117 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 KRTDAPP60985 99 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 PMVKQ15126 192 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 AMELXQ99217 191 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
SF3A1-206ENST00000471037 Q9HAA7 133 aa5.99□□□□□ -1.45
SF3A1-206ENST00000471037 CCL25O15444 150 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 C3orf79P0CE67 100 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 PET117Q6UWS5 81 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 Q8N3U1 123 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 OR10D4PQ8NGN7 298 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 TM2D2Q9BX73 214 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 CST9LQ9H4G1 147 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 PRR34Q9NV39 138 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 KLK12Q9UKR0 248 aa5.98□□□□□ -1.45
SF3A1-206ENST00000471037 C20orf202A1L168 122 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 H0Y8G0 127 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 CRPP02741 224 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 REG3AQ06141 175 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 WFDC2Q14508 124 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 RNASE13Q5GAN3 156 aaKnown RBP5.97□□□□□ -1.45
SF3A1-206ENST00000471037 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
SF3A1-206ENST00000471037 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 F8VRH5 84 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 UBE2D1P51668 147 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 AKR1D1P51857 326 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 SEC11AP67812 179 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 ODF1Q14990 250 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 MIAQ16674 131 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 ZC2HC1BQ5TFG8 222 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
SF3A1-206ENST00000471037 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.46
SF3A1-206ENST00000471037 TRAV8-3A0A0A6YYJ7 113 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 TRAV13-1A0A0B4J241 112 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 TRAV8-4A0A0B4J246 113 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 LINC00959A0A1B0GUT2 108 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 PLNP26678 52 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 SS18Q15532 418 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 CLPSL2Q6UWE3 100 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 FAM19A3Q7Z5A8 133 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 UBE2WQ96B02 151 aa5.95□□□□□ -1.46
SF3A1-206ENST00000471037 MRPL35Q9NZE8 188 aaKnown RBP5.95□□□□□ -1.46
SF3A1-206ENST00000471037 IGLV4-69A0A075B6H9 119 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 IGKV3OR2-268A0A0C4DH90 116 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 LCE2BO14633 110 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 DPM2O94777 84 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 IGLC3P0DOY3 106 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
SF3A1-206ENST00000471037 ENHOQ6UWT2 76 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 SCXQ7RTU7 201 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 GEMIN7Q9H840 131 aaKnown RBP5.94□□□□□ -1.46
SF3A1-206ENST00000471037 COX11Q9Y6N1 276 aa5.94□□□□□ -1.46
SF3A1-206ENST00000471037 LRP1Q07954 4544 aaKnown RBP5.94□□□□□ -1.46
SF3A1-206ENST00000471037 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 SCGB1D1O95968 90 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 OXTP01178 125 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 IGKCP01834 107 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 HERVK_113P63121 156 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 JOSD1Q15040 202 aaPredicted RBP5.93□□□□□ -1.46
SF3A1-206ENST00000471037 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 RMI2Q96E14 147 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 PMCHL2Q9BQD1 86 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 CHAC1Q9BUX1 264 aa5.93□□□□□ -1.46
SF3A1-206ENST00000471037 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.92□□□□□ -1.46
SF3A1-206ENST00000471037 IGLV5-45A0A087WSX0 123 aa5.92□□□□□ -1.46
SF3A1-206ENST00000471037 C11orf86A6NJI1 115 aa5.92□□□□□ -1.46
SF3A1-206ENST00000471037 LECT2O14960 151 aa5.92□□□□□ -1.46
SF3A1-206ENST00000471037 CD164L2Q6UWJ8 174 aa5.92□□□□□ -1.46
SF3A1-206ENST00000471037 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
SF3A1-206ENST00000471037 C1orf43Q9BWL3 253 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms