RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 C19orf84I3L1E1 186 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 LINC01561Q8N1V8 128 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 IGKV2-29A2NJV5 120 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 CCL24O00175 119 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 PROK1P58294 105 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 Q9H8V8 135 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 PTPN13Q12923 2485 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 GYPEP15421 78 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 BEAN1Q3B7T3 259 aa8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-204ENST00000470951 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
SRGAP3-204ENST00000470951 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
SRGAP3-204ENST00000470951 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
SRGAP3-204ENST00000470951 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
SRGAP3-204ENST00000470951 BAALC-AS2P0C853 105 aa8.15□□□□□ -1.1
SRGAP3-204ENST00000470951 NBPF19A0A087WUL8 3843 aa8.15□□□□□ -1.1
SRGAP3-204ENST00000470951 OVOL2Q9BRP0 275 aa8.15□□□□□ -1.1
SRGAP3-204ENST00000470951 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 IGHV4-61A0A0C4DH41 118 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 Q6ZSN1 163 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 AKAP6Q13023 2319 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 CELSR2Q9HCU4 2923 aa8.14□□□□□ -1.11
SRGAP3-204ENST00000470951 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 ZNF625Q96I27 306 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 SORL1Q92673 2214 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 HTN1P15515 57 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
SRGAP3-204ENST00000470951 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 COX6A2Q02221 97 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 FHL2Q14192 279 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 Q8N2B8 174 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 Q9UF83 564 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
SRGAP3-204ENST00000470951 MSMBP08118 114 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 C11orf72Q8NBR9 251 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
SRGAP3-204ENST00000470951 ABCA12Q86UK0 2595 aa8.1□□□□□ -1.11
SRGAP3-204ENST00000470951 SPG11Q96JI7 2443 aa8.1□□□□□ -1.11
SRGAP3-204ENST00000470951 HOXD3P31249 432 aaPredicted RBP8.1□□□□□ -1.11
SRGAP3-204ENST00000470951 DEFB131AP59861 70 aa8.1□□□□□ -1.11
SRGAP3-204ENST00000470951 CSMD2Q7Z408 3487 aa8.1□□□□□ -1.11
SRGAP3-204ENST00000470951 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
SRGAP3-204ENST00000470951 FLNBO75369 2602 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-204ENST00000470951 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
SRGAP3-204ENST00000470951 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
SRGAP3-204ENST00000470951 RBMY1BA6NDE4 496 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 RBMY1EA6NEQ0 496 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 RBMY1DP0C7P1 496 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 CD164Q04900 197 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 LINC01356Q8N9X3 169 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 POLQO75417 2590 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 TRBV10-1A0A0K0K1A3 114 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 CRPP02741 224 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 C10orf99Q6UWK7 81 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 FBN2P35556 2912 aa8.08□□□□□ -1.12
SRGAP3-204ENST00000470951 INSP01308 110 aa8.07□□□□□ -1.12
SRGAP3-204ENST00000470951 B4DSR2 109 aa8.07□□□□□ -1.12
SRGAP3-204ENST00000470951 DNAL4O96015 105 aa8.07□□□□□ -1.12
SRGAP3-204ENST00000470951 Q6JHZ5 121 aa8.07□□□□□ -1.12
SRGAP3-204ENST00000470951 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
SRGAP3-204ENST00000470951 H0YGX0 51 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 IGHV4-59P01825 116 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 CCL19Q99731 98 aa8.06□□□□□ -1.12
SRGAP3-204ENST00000470951 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
SRGAP3-204ENST00000470951 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.05□□□□□ -1.12
SRGAP3-204ENST00000470951 UNC79Q9P2D8 2635 aa8.05□□□□□ -1.12
SRGAP3-204ENST00000470951 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
SRGAP3-204ENST00000470951 IGHV4-30-2A0A087WSY4 118 aa8.04□□□□□ -1.12
SRGAP3-204ENST00000470951 PRM2P04554 102 aa8.04□□□□□ -1.12
SRGAP3-204ENST00000470951 PRYO14603 147 aa8.04□□□□□ -1.12
SRGAP3-204ENST00000470951 DEFB112Q30KQ8 113 aa8.04□□□□□ -1.12
SRGAP3-204ENST00000470951 APCP25054 2843 aa8.04□□□□□ -1.12
SRGAP3-204ENST00000470951 Q96MF0 132 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 Q9HAA7 133 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 SVEP1Q4LDE5 3571 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 K7EQD1 137 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms