RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MALP21145 153 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 C14orf132Q9NPU4 83 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 A0A1B0GX51 115 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 ATOX1O00244 68 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 ITPR3Q14573 2671 aa9.9□□□□□ -0.82
NPHP4-207ENST00000470763 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
NPHP4-207ENST00000470763 F8P00451 2351 aa9.9□□□□□ -0.82
NPHP4-207ENST00000470763 DNAL4O96015 105 aa9.9□□□□□ -0.82
NPHP4-207ENST00000470763 IGLV5-39A0A0G2JS06 123 aa9.89□□□□□ -0.83
NPHP4-207ENST00000470763 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
NPHP4-207ENST00000470763 HIST1H4AP62805 103 aaKnown RBP9.89□□□□□ -0.83
NPHP4-207ENST00000470763 FAM222AQ5U5X8 452 aa9.88□□□□□ -0.83
NPHP4-207ENST00000470763 PIMREGQ9BSJ6 248 aa9.88□□□□□ -0.83
NPHP4-207ENST00000470763 MTORP42345 2549 aa9.88□□□□□ -0.83
NPHP4-207ENST00000470763 A6NDX4 124 aa9.87□□□□□ -0.83
NPHP4-207ENST00000470763 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
NPHP4-207ENST00000470763 DSCR8Q96T75 97 aa9.87□□□□□ -0.83
NPHP4-207ENST00000470763 A0A087WYN8 130 aa9.87□□□□□ -0.83
NPHP4-207ENST00000470763 HIST2H2BDQ6DRA6 164 aa9.87□□□□□ -0.83
NPHP4-207ENST00000470763 NF1P21359 2839 aa9.86□□□□□ -0.83
NPHP4-207ENST00000470763 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
NPHP4-207ENST00000470763 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
NPHP4-207ENST00000470763 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
NPHP4-207ENST00000470763 SETD2Q9BYW2 2564 aaPredicted RBP9.86□□□□□ -0.83
NPHP4-207ENST00000470763 CFHR3Q02985 330 aa9.85□□□□□ -0.83
NPHP4-207ENST00000470763 OR13C6PQ8NH95 151 aa9.85□□□□□ -0.83
NPHP4-207ENST00000470763 CRPP02741 224 aa9.85□□□□□ -0.83
NPHP4-207ENST00000470763 DEFB131AP59861 70 aa9.85□□□□□ -0.83
NPHP4-207ENST00000470763 OXTP01178 125 aa9.84□□□□□ -0.83
NPHP4-207ENST00000470763 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
NPHP4-207ENST00000470763 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
NPHP4-207ENST00000470763 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
NPHP4-207ENST00000470763 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
NPHP4-207ENST00000470763 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
NPHP4-207ENST00000470763 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.83
NPHP4-207ENST00000470763 PSMB8P28062 276 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 IGHV4-61A0A0C4DH41 118 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
NPHP4-207ENST00000470763 NCR3O14931 201 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 RPL28P46779 137 aaKnown RBP9.83□□□□□ -0.84
NPHP4-207ENST00000470763 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 RNF152Q8N8N0 203 aa9.83□□□□□ -0.84
NPHP4-207ENST00000470763 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 ACANP16112 2415 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 Q96MF0 132 aa9.82□□□□□ -0.84
NPHP4-207ENST00000470763 FLNAP21333 2647 aaKnown RBP9.82□□□□□ -0.84
NPHP4-207ENST00000470763 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 SLPIP03973 132 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 F5H768 121 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 TMEM258P61165 79 aa9.81□□□□□ -0.84
NPHP4-207ENST00000470763 LECT2O14960 151 aa9.8□□□□□ -0.84
NPHP4-207ENST00000470763 C4orf26Q17RF5 130 aa9.8□□□□□ -0.84
NPHP4-207ENST00000470763 Q6JHZ5 121 aa9.8□□□□□ -0.84
NPHP4-207ENST00000470763 ZANQ9Y493 2812 aa9.79□□□□□ -0.84
NPHP4-207ENST00000470763 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
NPHP4-207ENST00000470763 C11orf72Q8NBR9 251 aa9.79□□□□□ -0.84
NPHP4-207ENST00000470763 WFDC9Q8NEX5 89 aa9.79□□□□□ -0.84
NPHP4-207ENST00000470763 TRAV25A0A0B4J276 109 aa9.78□□□□□ -0.84
NPHP4-207ENST00000470763 HILS1P60008 231 aa9.78□□□□□ -0.84
NPHP4-207ENST00000470763 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
NPHP4-207ENST00000470763 LINC00158P58513 81 aa9.77□□□□□ -0.84
NPHP4-207ENST00000470763 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.84
NPHP4-207ENST00000470763 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
NPHP4-207ENST00000470763 PF4P02776 101 aa9.77□□□□□ -0.85
NPHP4-207ENST00000470763 DEFB136Q30KP8 78 aa9.77□□□□□ -0.85
NPHP4-207ENST00000470763 AVPP01185 164 aa9.77□□□□□ -0.85
NPHP4-207ENST00000470763 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
NPHP4-207ENST00000470763 WNK1Q9H4A3 2382 aa9.76□□□□□ -0.85
NPHP4-207ENST00000470763 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
NPHP4-207ENST00000470763 FHL2Q14192 279 aa9.75□□□□□ -0.85
NPHP4-207ENST00000470763 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
NPHP4-207ENST00000470763 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
NPHP4-207ENST00000470763 PFN2P35080 140 aa9.75□□□□□ -0.85
NPHP4-207ENST00000470763 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
NPHP4-207ENST00000470763 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
NPHP4-207ENST00000470763 SLURP1P55000 103 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 CCL18P55774 89 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 C10orf105Q8TEF2 133 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 XCL2Q9UBD3 114 aa9.74□□□□□ -0.85
NPHP4-207ENST00000470763 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
NPHP4-207ENST00000470763 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
NPHP4-207ENST00000470763 Q5XG85 94 aa9.73□□□□□ -0.85
NPHP4-207ENST00000470763 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
NPHP4-207ENST00000470763 PAX4O43316 350 aa9.72□□□□□ -0.85
NPHP4-207ENST00000470763 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
NPHP4-207ENST00000470763 H0YGX0 51 aa9.72□□□□□ -0.85
NPHP4-207ENST00000470763 DEFB113Q30KQ7 82 aa9.72□□□□□ -0.85
NPHP4-207ENST00000470763 KRTAP1-3Q8IUG1 177 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms