RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CCL25O15444 150 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 IFNA7P01567 189 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 CRPP02741 224 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 SFTA3P0C7M3 94 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 SMIM17P0DL12 118 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 RNASE3P12724 160 aaKnown RBP1.54□□□□□ -2.16
UBXN4-206ENST00000470687 TPT1P13693 172 aaKnown RBP1.54□□□□□ -2.16
UBXN4-206ENST00000470687 ATP6V0CP27449 155 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 GCHFRP30047 84 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 RAB5CP51148 216 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 H2BFSP57053 126 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 RPS20P60866 119 aaKnown RBP1.54□□□□□ -2.16
UBXN4-206ENST00000470687 RAB2AP61019 212 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 UBE2G1P62253 170 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 SMAGPQ0VAQ4 97 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 AKR1C8PQ5T2L2 129 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 FAM104BQ5XKR9 115 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 PRNTQ86SH4 94 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 NIT1Q86X76 327 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 WFDC10BQ8IUB3 73 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 C9orf163Q8N9P6 203 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 Q8TAT8 98 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 ZNF471Q9BX82 626 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-206ENST00000470687 DPH3P1Q9H4G8 78 aa1.54□□□□□ -2.16
UBXN4-206ENST00000470687 HUWE1Q7Z6Z7 4374 aaKnown RBP1.53□□□□□ -2.16
UBXN4-206ENST00000470687 TRBV25-1A0A075B6N4 114 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 B4DEV8 164 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 TMEM262E9PQX1 116 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 PPP1R17O96001 155 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 LTAP01374 205 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 IGHV3-30P01768 117 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 IGHV3-33P01772 117 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 ARMS2P0C7Q2 107 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 LINC00694P0DN24 101 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 IGHV3-30-3P0DP02 117 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 IGHV3-30-5P0DP03 117 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 NTF3P20783 257 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 CEBPGP53567 150 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 UBE2D3P61077 147 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 CNBPP62633 177 aaKnown RBP1.53□□□□□ -2.16
UBXN4-206ENST00000470687 UBE2D2P62837 147 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 ZNF345Q14585 488 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 IQCJQ1A5X6 159 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 PRR9Q5T870 116 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 SLC25A34Q6PIV7 304 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 SCGB1D4Q6XE38 83 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 CMYA5Q8N3K9 4069 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 MIR7-3HGQ8N6C7 128 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 SPANXA2-OT1Q8N9U9 137 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 GATD1Q8NB37 220 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 OR2T35Q8NGX2 323 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 DNAH3Q8TD57 4116 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 TVP23CQ96ET8 276 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 DPH3Q96FX2 82 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 ZC2HC1AQ96GY0 325 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 EIF5A2Q9GZV4 153 aaKnown RBP1.53□□□□□ -2.16
UBXN4-206ENST00000470687 KIAA1109Q2LD37 5005 aa1.53□□□□□ -2.16
UBXN4-206ENST00000470687 HYDINQ4G0P3 5121 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 IGHV3-64A0A075B6Q5 118 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 TRAV1-1A0A0B4J248 108 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 IGHV1-24A0A0C4DH33 117 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 A0A1B0GXF2 115 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 HMSDA8MTL9 139 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 PDE6DO43924 150 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 PFDN1O60925 122 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 NCR2O95944 276 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 ANGP03950 147 aaKnown RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 S100A6P06703 90 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 LINC00614P0C842 121 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 TRGC1P0CF51 173 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 ZNF25P17030 456 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SULT1A2P50226 295 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 ZNF80P51504 273 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 MP68P56378 58 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 CIRBPQ14011 172 aaKnown RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 FAM74A4Q5TZK3 123 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SPANXN1Q5VSR9 72 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SMIM15Q7Z3B0 74 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 BAGE2Q86Y30 109 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 AMN1Q8IY45 258 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 C9orf62Q8N4C0 152 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 FER1L6-AS1Q8NA97 138 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 TSKUQ8WUA8 353 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 MBD3L1Q8WWY6 194 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 UBE2WQ96B02 151 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 SMIM3Q9BZL3 60 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 NIT2Q9NQR4 276 aa1.52□□□□□ -2.17
UBXN4-206ENST00000470687 ZNF706Q9Y5V0 76 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-206ENST00000470687 IGLV10-54A0A075B6I4 117 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 IGHV3-73A0A0B4J1V6 119 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 MAP1LC3B2A6NCE7 125 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 H3BVH4 76 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 M0QY20 66 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 M0R381 172 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms