RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TMEM191AQ9H0A3 160 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 SMCO4Q9NRQ5 59 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 KLK5Q9Y337 293 aaPredicted RBP2.43□□□□□ -2.02
COL9A1-206ENST00000470652 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 TRAPPC1Q9Y5R8 145 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 PKHD1P08F94 4074 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 TRBV24-1A0A075B6N3 115 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 IGHV3-33P01772 117 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 APCSP02743 223 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 SMIM17P0DL12 118 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 IGHV3-30-3P0DP02 117 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 RAB5AP20339 215 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 S100PP25815 95 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 CKS2P33552 79 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 IFI27P40305 119 aaPredicted RBP2.42□□□□□ -2.02
COL9A1-206ENST00000470652 UBE2D3P61077 147 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 UBE2D2P62837 147 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 RPL39P62891 51 aaKnown RBP2.42□□□□□ -2.02
COL9A1-206ENST00000470652 LAGE3Q14657 143 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 OR10J3Q5JRS4 329 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 KCNIP4Q6PIL6 250 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 RASL11AQ6T310 242 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 LYPD5Q6UWN5 251 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 LINC00173Q6ZV60 143 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 Q8N976 141 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 PTH2Q96A98 100 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 BORCS7Q96B45 105 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 PRELID3AQ96N28 172 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 C18orf15Q96N68 181 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 PRO0255Q9UI72 69 aa2.42□□□□□ -2.02
COL9A1-206ENST00000470652 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
COL9A1-206ENST00000470652 IGLV4-60A0A075B6I1 120 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 IGKV2-28A0A075B6P5 120 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 TRBV6-4A0A1B0GX49 114 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 SDHAF1A6NFY7 115 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 LY6G6CO95867 125 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 IGKV2D-28P01615 120 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 S100A1P23297 94 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 HERVK_113P61574 105 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 RHOHQ15669 191 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 PDZD11Q5EBL8 140 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 ZFP2Q6ZN57 461 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 ATP5L2Q7Z4Y8 100 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 C18orf32Q8TCD1 76 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 TMEM70Q9BUB7 260 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 CHCHD7Q9BUK0 85 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 ICOSQ9Y6W8 199 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 LRP1BQ9NZR2 4599 aa2.41□□□□□ -2.02
COL9A1-206ENST00000470652 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 A0A096LNJ9 63 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 IGKV3OR2-268A0A0C4DH90 116 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 NUPR2A6NF83 97 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BKO60814 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HLA-DQA1P01909 254 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BJP06899 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BOP23527 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BBP33778 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BDP58876 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BCP62807 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST2H2BEQ16778 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 MPV17L2Q567V2 206 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.4□□□□□ -2.03
COL9A1-206ENST00000470652 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
COL9A1-206ENST00000470652 SPATA12Q7Z6I5 190 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 DAZ4Q86SG3 579 aaKnown RBP2.4□□□□□ -2.03
COL9A1-206ENST00000470652 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 LINC01561Q8N1V8 128 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 FAM19A2Q8N3H0 131 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BHQ93079 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 MRAP2Q96G30 205 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BNQ99877 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BMQ99879 126 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 PRADC1Q9BSG0 188 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 GNB1LQ9BYB4 327 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 ST20Q9HBF5 79 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 NIT2Q9NQR4 276 aa2.4□□□□□ -2.03
COL9A1-206ENST00000470652 IGLV10-54A0A075B6I4 117 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 TRAV9-1A0A075B6T8 112 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 PMCHP20382 165 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 NDUFA6P56556 154 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 WFDC2Q14508 124 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 MRPL23Q16540 153 aaKnown RBP2.39□□□□□ -2.03
COL9A1-206ENST00000470652 LINC01620Q4KN68 170 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 Q6ZUT4 128 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 SMIM15Q7Z3B0 74 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 NIT1Q86X76 327 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 UBE2DNLQ8IWF7 75 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 MTURNQ8N3F0 131 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 GTSF1LQ9H1H1 148 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 MAP1LC3AQ9H492 121 aa2.39□□□□□ -2.03
COL9A1-206ENST00000470652 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms