RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 C2orf66Q6UXQ4 117 aa7□□□□□ -1.29
RFTN1-208ENST00000470458 C7orf33Q8WU49 177 aa7□□□□□ -1.29
RFTN1-208ENST00000470458 Q6ZUT4 128 aa6.99□□□□□ -1.29
RFTN1-208ENST00000470458 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
RFTN1-208ENST00000470458 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
RFTN1-208ENST00000470458 HSPG2P98160 4391 aa6.99□□□□□ -1.29
RFTN1-208ENST00000470458 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 RAB5BP61020 215 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 COX6A2Q02221 97 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 FABP9Q0Z7S8 132 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 TIMM17AQ99595 171 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
RFTN1-208ENST00000470458 APOC3P02656 99 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 SLPIP03973 132 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 FA2HQ7L5A8 372 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 ERASQ7Z444 233 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
RFTN1-208ENST00000470458 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.29
RFTN1-208ENST00000470458 IGLV4-3A0A075B6K6 122 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 A0A087WZ39 114 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 NDUFA1O15239 70 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
RFTN1-208ENST00000470458 HERVK_113P63121 156 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
RFTN1-208ENST00000470458 TOMM6Q96B49 74 aa6.96□□□□□ -1.3
RFTN1-208ENST00000470458 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
RFTN1-208ENST00000470458 A0A087WYN8 130 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 LINC01546A6NGU7 62 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 IGIPA6NJ69 53 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 PRSS2P07478 247 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 HAMPP81172 84 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 ORAOV1Q8WV07 137 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 AMELXQ99217 191 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
RFTN1-208ENST00000470458 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
RFTN1-208ENST00000470458 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
RFTN1-208ENST00000470458 TRAPPC1Q9Y5R8 145 aa6.95□□□□□ -1.3
RFTN1-208ENST00000470458 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.95□□□□□ -1.3
RFTN1-208ENST00000470458 UBE2D1P51668 147 aa6.94□□□□□ -1.3
RFTN1-208ENST00000470458 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
RFTN1-208ENST00000470458 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
RFTN1-208ENST00000470458 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
RFTN1-208ENST00000470458 PACRGQ96M98 296 aaPredicted RBP6.94□□□□□ -1.3
RFTN1-208ENST00000470458 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
RFTN1-208ENST00000470458 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
RFTN1-208ENST00000470458 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
RFTN1-208ENST00000470458 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
RFTN1-208ENST00000470458 STPG4Q8N801 248 aa6.93□□□□□ -1.3
RFTN1-208ENST00000470458 J3QL48 77 aa6.92□□□□□ -1.3
RFTN1-208ENST00000470458 OXTP01178 125 aa6.92□□□□□ -1.3
RFTN1-208ENST00000470458 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
RFTN1-208ENST00000470458 CKS1BP61024 79 aa6.92□□□□□ -1.3
RFTN1-208ENST00000470458 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
RFTN1-208ENST00000470458 LINC00614P0C842 121 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 CXCL5P42830 114 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 C6orf226Q5I0X4 101 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 Q6ZRU5 148 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
RFTN1-208ENST00000470458 A0A096LNI7 61 aa6.9□□□□□ -1.3
RFTN1-208ENST00000470458 H3BRM9 83 aa6.9□□□□□ -1.3
RFTN1-208ENST00000470458 ATP5LO75964 103 aa6.9□□□□□ -1.3
RFTN1-208ENST00000470458 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
RFTN1-208ENST00000470458 PMVKQ15126 192 aa6.9□□□□□ -1.3
RFTN1-208ENST00000470458 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
RFTN1-208ENST00000470458 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
RFTN1-208ENST00000470458 CHTF8P0CG12 524 aa6.89□□□□□ -1.31
RFTN1-208ENST00000470458 Q8IZM0 81 aa6.89□□□□□ -1.31
RFTN1-208ENST00000470458 LINC00526Q96FQ7 95 aa6.89□□□□□ -1.31
RFTN1-208ENST00000470458 HBDP02042 147 aa6.88□□□□□ -1.31
RFTN1-208ENST00000470458 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
RFTN1-208ENST00000470458 ODF1Q14990 250 aa6.88□□□□□ -1.31
RFTN1-208ENST00000470458 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
RFTN1-208ENST00000470458 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
RFTN1-208ENST00000470458 Q6ZRP5 223 aa6.88□□□□□ -1.31
RFTN1-208ENST00000470458 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
RFTN1-208ENST00000470458 NDUFC2-KCTD14E9PQ53 114 aa6.87□□□□□ -1.31
RFTN1-208ENST00000470458 PANO1I0J062 215 aa6.87□□□□□ -1.31
RFTN1-208ENST00000470458 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
RFTN1-208ENST00000470458 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
RFTN1-208ENST00000470458 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
RFTN1-208ENST00000470458 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
RFTN1-208ENST00000470458 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
RFTN1-208ENST00000470458 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
RFTN1-208ENST00000470458 C18orf32Q8TCD1 76 aa6.86□□□□□ -1.31
RFTN1-208ENST00000470458 F8VRH5 84 aa6.85□□□□□ -1.31
RFTN1-208ENST00000470458 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
RFTN1-208ENST00000470458 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
RFTN1-208ENST00000470458 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
RFTN1-208ENST00000470458 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
RFTN1-208ENST00000470458 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
RFTN1-208ENST00000470458 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
RFTN1-208ENST00000470458 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms