RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 COX6A2Q02221 97 aa10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 CITED1Q99966 193 aa10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 TEX49A0A1B0GTD5 131 aa10.15□□□□□ -0.78
SMARCD3-205ENST00000469154 Q9H8V8 135 aa10.15□□□□□ -0.78
SMARCD3-205ENST00000469154 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.79
SMARCD3-205ENST00000469154 DAND5Q8N907 189 aa10.15□□□□□ -0.79
SMARCD3-205ENST00000469154 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.79
SMARCD3-205ENST00000469154 CLEC2BQ92478 149 aa10.15□□□□□ -0.79
SMARCD3-205ENST00000469154 A0A1W2PRX2 142 aa10.14□□□□□ -0.79
SMARCD3-205ENST00000469154 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
SMARCD3-205ENST00000469154 SNCGO76070 127 aa10.14□□□□□ -0.79
SMARCD3-205ENST00000469154 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
SMARCD3-205ENST00000469154 CITED2Q99967 270 aaPredicted RBP10.14□□□□□ -0.79
SMARCD3-205ENST00000469154 Q6ZTI0 123 aa10.12□□□□□ -0.79
SMARCD3-205ENST00000469154 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
SMARCD3-205ENST00000469154 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
SMARCD3-205ENST00000469154 HERV-K104P63124 156 aa10.11□□□□□ -0.79
SMARCD3-205ENST00000469154 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
SMARCD3-205ENST00000469154 ANAPC13Q9BS18 74 aa10.11□□□□□ -0.79
SMARCD3-205ENST00000469154 CDC42SE2Q9NRR3 84 aa10.11□□□□□ -0.79
SMARCD3-205ENST00000469154 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE12JA6NER3 117 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 CCL24O00175 119 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE4Q13068 117 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE5Q13069 117 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 Q6Q795 121 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 WNK1Q9H4A3 2382 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 TENM1Q9UKZ4 2725 aa10.1□□□□□ -0.79
SMARCD3-205ENST00000469154 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
SMARCD3-205ENST00000469154 F5H768 121 aa10.09□□□□□ -0.79
SMARCD3-205ENST00000469154 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
SMARCD3-205ENST00000469154 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
SMARCD3-205ENST00000469154 COX7A2LO14548 114 aa10.08□□□□□ -0.8
SMARCD3-205ENST00000469154 UBE2L6O14933 153 aa10.08□□□□□ -0.8
SMARCD3-205ENST00000469154 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
SMARCD3-205ENST00000469154 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 FBN1P35555 2871 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-205ENST00000469154 TRGV2A0A075B6R0 118 aa10.04□□□□□ -0.8
SMARCD3-205ENST00000469154 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
SMARCD3-205ENST00000469154 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
SMARCD3-205ENST00000469154 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 TRACP01848 142 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 TTC32Q5I0X7 151 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 FAM110AQ9BQ89 295 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 GAGE7O76087 117 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
SMARCD3-205ENST00000469154 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
SMARCD3-205ENST00000469154 COX7B2Q8TF08 81 aa10.02□□□□□ -0.81
SMARCD3-205ENST00000469154 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
SMARCD3-205ENST00000469154 PF4P02776 101 aa10.02□□□□□ -0.81
SMARCD3-205ENST00000469154 ACYP1P07311 99 aa10.01□□□□□ -0.81
SMARCD3-205ENST00000469154 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
SMARCD3-205ENST00000469154 TRGV4A0A0C4DH28 118 aa10.01□□□□□ -0.81
SMARCD3-205ENST00000469154 NHLRC4P0CG21 123 aaPredicted RBP10.01□□□□□ -0.81
SMARCD3-205ENST00000469154 COL6A5A8TX70 2615 aa10□□□□□ -0.81
SMARCD3-205ENST00000469154 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
SMARCD3-205ENST00000469154 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
SMARCD3-205ENST00000469154 GAGE6Q13070 117 aa9.99□□□□□ -0.81
SMARCD3-205ENST00000469154 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
SMARCD3-205ENST00000469154 CRPP02741 224 aa9.99□□□□□ -0.81
SMARCD3-205ENST00000469154 VWFP04275 2813 aa9.99□□□□□ -0.81
SMARCD3-205ENST00000469154 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
SMARCD3-205ENST00000469154 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
SMARCD3-205ENST00000469154 C19orf73Q9NVV2 129 aa9.98□□□□□ -0.81
SMARCD3-205ENST00000469154 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
SMARCD3-205ENST00000469154 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
SMARCD3-205ENST00000469154 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
SMARCD3-205ENST00000469154 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
SMARCD3-205ENST00000469154 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.81
SMARCD3-205ENST00000469154 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.81
SMARCD3-205ENST00000469154 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
SMARCD3-205ENST00000469154 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.81
SMARCD3-205ENST00000469154 FHL2Q14192 279 aa9.96□□□□□ -0.82
SMARCD3-205ENST00000469154 C3orf56Q8N813 242 aa9.95□□□□□ -0.82
SMARCD3-205ENST00000469154 CHCHD5Q9BSY4 110 aa9.95□□□□□ -0.82
SMARCD3-205ENST00000469154 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
SMARCD3-205ENST00000469154 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms