RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TRAV10A0A0B4J240 114 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 IGKV3D-7A0A0C4DH55 119 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 IGKV3OR2-268A0A0C4DH90 116 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 TCRBV4S1A1TA0A5B7 111 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 C9orf170A2RU37 121 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 RRAS2P62070 204 aaPredicted RBP1.58□□□□□ -2.16
LSM5-209ENST00000468872 TMEM254Q8TBM7 123 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 TP53RKQ96S44 253 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 COMMD3Q9UBI1 195 aa1.58□□□□□ -2.16
LSM5-209ENST00000468872 DNAH8Q96JB1 4490 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.57□□□□□ -2.16
LSM5-209ENST00000468872 NPFFO15130 113 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 DLEU1O43261 78 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 NCR2O95944 276 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 TRACP01848 142 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 SMR3BP02814 79 aaPredicted RBP1.57□□□□□ -2.16
LSM5-209ENST00000468872 C10orf55Q5SWW7 151 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 CTAGE3PQ8IX95 158 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 CLECL1Q8IZS7 167 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 MAGOHBQ96A72 148 aaKnown RBP1.57□□□□□ -2.16
LSM5-209ENST00000468872 C2orf88Q9BSF0 95 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 LINC00470Q9BZP3 86 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 MED9Q9NWA0 146 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 KIAA1549Q9HCM3 1950 aa1.57□□□□□ -2.16
LSM5-209ENST00000468872 MYH7P12883 1935 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 ZNF670-ZNF695F2Z2N8 137 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 GNG7O60262 68 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 ERC2-IT1O76042 136 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 ANGP03950 147 aaKnown RBP1.56□□□□□ -2.16
LSM5-209ENST00000468872 CD2P06729 351 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 BRS3P32247 399 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 ZCCHC23Q6ZST2 131 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 OR10AC1Q8NH08 325 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 OTOSQ8NHW6 89 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 C1orf54Q8WWF1 131 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 SDF2Q99470 211 aa1.56□□□□□ -2.16
LSM5-209ENST00000468872 METTL1Q9UBP6 276 aaKnown RBP1.56□□□□□ -2.16
LSM5-209ENST00000468872 LSM2Q9Y333 95 aaKnown RBP1.56□□□□□ -2.16
LSM5-209ENST00000468872 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
LSM5-209ENST00000468872 TRAV14DV4A0A0A6YYC5 116 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 LOC107986453A0A1B0GWG9 222 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 K7ERU9 68 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 SMIM24O75264 130 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 PITX3O75364 302 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 IGF2P01344 180 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 MMGT1Q8N4V1 131 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 CGREF1Q99674 301 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 SLC35B3Q9H1N7 401 aa1.55□□□□□ -2.16
LSM5-209ENST00000468872 MYH6P13533 1939 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 SCN3AQ9NY46 2000 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 HEATR5BQ9P2D3 2071 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 M0R129 80 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 TNFP01375 233 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 CXCL8P10145 99 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 COPZ1P61923 177 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 SELENOWP63302 87 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 MIR22HGQ0VDD5 57 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 ASB16-AS1Q495Z4 193 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 FOXI2Q6ZQN5 318 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 OR5AS1Q8N127 324 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 WFDC9Q8NEX5 89 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 CST11Q9H112 138 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
LSM5-209ENST00000468872 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
LSM5-209ENST00000468872 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 ZNF736B4DX44 427 aaPredicted RBP1.53□□□□□ -2.16
LSM5-209ENST00000468872 J3QR89 54 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 HCRTO43612 131 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
LSM5-209ENST00000468872 HIST1H1BP16401 226 aaKnown RBP1.53□□□□□ -2.16
LSM5-209ENST00000468872 PCBD1P61457 104 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 PLGLB1Q02325 96 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 EMX2Q04743 252 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 CIRBPQ14011 172 aaKnown RBP1.53□□□□□ -2.16
LSM5-209ENST00000468872 NEDD8Q15843 81 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 CLLU1Q5K131 121 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 GLIPR1L1Q6UWM5 242 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 OR5AK2Q8NH90 309 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 ARL11Q969Q4 196 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 LINC00052Q96N35 136 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 BPESC1Q9GZL8 116 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 MPC1Q9Y5U8 109 aa1.53□□□□□ -2.16
LSM5-209ENST00000468872 SPTBP11277 2137 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 TPST1O60507 370 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 UQCRHP07919 91 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 MT1HL1P0DM35 61 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 C2orf82Q6UX34 121 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.52□□□□□ -2.17
LSM5-209ENST00000468872 C10orf111Q8N326 155 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 TNCP24821 2201 aa1.52□□□□□ -2.17
LSM5-209ENST00000468872 TRBV20-1A0A075B6N2 111 aa1.51□□□□□ -2.17
LSM5-209ENST00000468872 C3orf85A0A1B0GTC6 90 aa1.51□□□□□ -2.17
LSM5-209ENST00000468872 LOC100130705A0A1B0GUX0 176 aa1.51□□□□□ -2.17
LSM5-209ENST00000468872 CKS2P33552 79 aa1.51□□□□□ -2.17
LSM5-209ENST00000468872 ETV6P41212 452 aa1.51□□□□□ -2.17
LSM5-209ENST00000468872 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
LSM5-209ENST00000468872 LSM3P62310 102 aaKnown RBP1.51□□□□□ -2.17
LSM5-209ENST00000468872 LOC107984156A0A0G2JMH3 177 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms