RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 CIB3Q96Q77 187 aaPredicted RBP2.04□□□□□ -2.08
GPNMB-207ENST00000468723 SLC25A21Q9BQT8 299 aaPredicted RBP2.04□□□□□ -2.08
GPNMB-207ENST00000468723 NPVFQ9HCQ7 196 aa2.04□□□□□ -2.08
GPNMB-207ENST00000468723 UQCC1Q9NVA1 299 aa2.04□□□□□ -2.08
GPNMB-207ENST00000468723 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
GPNMB-207ENST00000468723 PKD1P98161 4303 aa2.04□□□□□ -2.08
GPNMB-207ENST00000468723 HERC2O95714 4834 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 STAB2Q8WWQ8 2551 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 A0A1B0GW54 56 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 A0A1W2PNM2 257 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 GZMBP10144 247 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 SLC25A6P12236 298 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 CSN1S1P47710 185 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 XCL1P47992 114 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 DEFA3P59666 94 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 HAMPP81172 84 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 RPL19P84098 196 aaKnown RBP2.03□□□□□ -2.08
GPNMB-207ENST00000468723 Q6ZTI0 123 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 Q8TAT8 98 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 ZNF431Q8TF32 576 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-207ENST00000468723 C2orf50Q96LR7 162 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 HYLS1Q96M11 299 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 FUT9Q9Y231 359 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 TIMM9Q9Y5J7 89 aa2.03□□□□□ -2.08
GPNMB-207ENST00000468723 TIMM8BQ9Y5J9 83 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-207ENST00000468723 TRGV1A0A0A0MS02 117 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 H3BPC8 53 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 NPYP01303 97 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 GPX1P07203 203 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 SFTA3P0C7M3 94 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 P0DMU3 169 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 RPL7P18124 248 aaKnown RBP2.02□□□□□ -2.09
GPNMB-207ENST00000468723 B2MP61769 119 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 GNG5P63218 68 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 BPIFA4PQ86YQ2 179 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 TVP23CQ96ET8 276 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 AGPAT4-IT1Q9H0P7 198 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 SLC39A9Q9NUM3 307 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 RYR1P21817 5038 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
GPNMB-207ENST00000468723 PCLOQ9Y6V0 5065 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 KIAA1109Q2LD37 5005 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 IGLV10-54A0A075B6I4 117 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 TMEM189A5PLL7 270 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 C11orf86A6NJI1 115 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 F6UZH7 168 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 G3V3Q6 166 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 LEPROTO15243 131 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 GNRH2O43555 120 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 CFDP00746 253 aaPredicted RBP2.01□□□□□ -2.09
GPNMB-207ENST00000468723 IGLC2P0DOY2 106 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 ATP5G3P48201 142 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 ESRGQ1W209 222 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 LCN15Q6UWW0 184 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 SMCR5Q8TEV8 140 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 SLC50A1Q9BRV3 221 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 NPCDR1Q9BY65 106 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 LYRM2Q9NU23 88 aaPredicted RBP2.01□□□□□ -2.09
GPNMB-207ENST00000468723 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
GPNMB-207ENST00000468723 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 MUC4Q99102 2169 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 TRBV19A0A075B6N1 114 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 C7orf71A4D174 169 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 H7BYZ3 331 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 IGHV3-30P01768 117 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 IGHV3-33P01772 117 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 NBEAP1P0C6P0 100 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 IGHV3-30-5P0DP03 117 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 S100A11P31949 105 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 CCL18P55774 89 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 TCTAP57738 103 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 UBE2L3P68036 154 aaKnown RBP2□□□□□ -2.09
GPNMB-207ENST00000468723 Q5BKY6 102 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 TMEM263Q8WUH6 116 aaKnown RBP2□□□□□ -2.09
GPNMB-207ENST00000468723 PPP1R1CQ8WVI7 109 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 NMES1Q9C002 83 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 IL36BQ9NZH7 164 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 CACFD1Q9UGQ2 172 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 HSPB11Q9Y547 144 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
GPNMB-207ENST00000468723 HSPG2P98160 4391 aa2□□□□□ -2.09
GPNMB-207ENST00000468723 TRAV9-1A0A075B6T8 112 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 TMSB15BA0A087X1C1 80 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 PIGBOS1A0A0B4J2F0 54 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 A8MTW9 85 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 C17orf112F2Z3M2 114 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 MPC2O95563 127 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 SMR3BP02814 79 aaPredicted RBP1.99□□□□□ -2.09
GPNMB-207ENST00000468723 SLC25A5P05141 298 aaKnown RBP1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BOP23527 126 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms