RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 SCGB2B2Q4G0G5 96 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 AKR1C8PQ5T2L2 129 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 OR8I2Q8N0Y5 310 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 TMEM263Q8WUH6 116 aaKnown RBP-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 DYDC1Q8WWB3 177 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 PRO3102Q9H379 93 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 BANF2Q9H503 90 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 ARMC1Q9NVT9 282 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 SPEF2Q9C093 1822 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 MAGI2Q86UL8 1455 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 TIAM2Q8IVF5 1701 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 SMG6Q86US8 1419 aaKnown RBP-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 PDCD11Q14690 1871 aaKnown RBP-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 NDUFA3O95167 84 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 IGLC1P0CG04 106 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 BTG2P78543 158 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 CCDC122Q5T0U0 273 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 DHRS4L2Q6PKH6 230 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 SMIM20Q8N5G0 67 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 TTC9CQ8N5M4 171 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 NUP35Q8NFH5 326 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 SEC11CQ9BY50 192 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 MRPL40Q9NQ50 206 aaKnown RBP-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 LYRM2Q9NU23 88 aaPredicted RBP-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 CHMP5Q9NZZ3 219 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 LENEPQ9Y5L5 61 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 KIAA1551Q9HCM1 1747 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 A2MP01023 1474 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 SHANK2Q9UPX8 1470 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 CDK5RAP2Q96SN8 1893 aa-1.84□□□□□ -2.7
SHQ1-204ENST00000468347 ANKRD36CQ5JPF3 1778 aa-1.85□□□□□ -2.7
SHQ1-204ENST00000468347 UHRF1BP1LA0JNW5 1464 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 BORCS7-ASMTA0A0B4J1R7 106 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 A0A1B0GU69 56 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 ERICH2A1L162 156 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 E7EQ34 232 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 H7BZZ5 65 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 HMGN4O00479 90 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 SFT2D2O95562 160 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 APOC3P02656 99 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 CST2P09228 141 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 SPANXN1Q5VSR9 72 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 GINS3Q9BRX5 216 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 NMNAT1Q9HAN9 279 aaPredicted RBP-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 MED31Q9Y3C7 131 aa-1.85□□□□□ -2.71
SHQ1-204ENST00000468347 CUX1P39880 1505 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 A6NIN4 97 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 ATG12O94817 140 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 SIX6O95475 246 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 IFNA17P01571 189 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 HSD11B1P28845 292 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 CMPK1P30085 196 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 SRP9P49458 86 aaKnown RBP-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 CCL8P80075 99 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 FAM223AQ8IWN6 122 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 FAM9CQ8IZT9 166 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 DEFB106AQ8N104 65 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 BTF3L4Q96K17 158 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 LLPHQ9BRT6 129 aaKnown RBP-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 YTHDC2Q9H6S0 1430 aaKnown RBP-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 SPEGQ15772 3267 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 MYOM1P52179 1685 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 ZNF831Q5JPB2 1677 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 QRICH2Q9H0J4 1663 aa-1.86□□□□□ -2.71
SHQ1-204ENST00000468347 WDFY3Q8IZQ1 3526 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 FAM223BA6NKX1 122 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 CCL22O00626 93 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 RBP4P02753 201 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 IL5P05113 134 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 S100A9P06702 114 aaKnown RBP-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 HLA-DRB4P13762 266 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 S100A5P33763 92 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 POLR2HP52434 150 aaKnown RBP-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 TPPP2P59282 170 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 LSM3P62310 102 aaKnown RBP-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 PSPHP78330 225 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 SFTA2Q6UW10 78 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 FAM24BQ8N5W8 94 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 GPATCH11Q8N954 259 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 FAM167A-AS1Q96KT0 104 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 DIP2CQ9Y2E4 1556 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 HLA-DRB4X5D2U9 266 aa-1.87□□□□□ -2.71
SHQ1-204ENST00000468347 TRAV13-2A0A0B4J235 113 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 FAM236AA0A1B0GUQ0 79 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 FAM236BA0A1B0GV22 79 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 YKT6O15498 198 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 S100A6P06703 90 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 MGPP08493 103 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 TPM1P09493 284 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 CBLN1P23435 193 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 SNCAP37840 140 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 TMEM244Q5VVB8 128 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 STX12Q86Y82 276 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 PRAP1Q96NZ9 151 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 UBE2D4Q9Y2X8 147 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 MAP3K5Q99683 1374 aa-1.88□□□□□ -2.71
SHQ1-204ENST00000468347 PPIP5K1Q6PFW1 1433 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 VPS13CQ709C8 3753 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 RGPD3A6NKT7 1758 aaPredicted RBP-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 RGPD4Q7Z3J3 1758 aa-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms