RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TCRAP04437 139 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 SMIM6P0DI80 62 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 LINC00694P0DN24 101 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 PCBD1P61457 104 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 FXYD3Q14802 87 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 DEFB133Q30KQ1 61 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 HSD17B12Q53GQ0 312 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 LINC00470Q9BZP3 86 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 ATG5Q9H1Y0 275 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 CALML5Q9NZT1 146 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 COPZ2Q9P299 210 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 ATRQ13535 2644 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 AHCTF1Q8WYP5 2266 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 KIAA1549LQ6ZVL6 1849 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 STAB1Q9NY15 2570 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 ANKHD1Q8IWZ3 2542 aaKnown RBP0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 ZGRF1Q86YA3 2104 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 BORCS7-ASMTA0A0B4J1R7 106 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 NBDYA0A0U1RRE5 68 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 FAM236AA0A1B0GUQ0 79 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 FAM236BA0A1B0GV22 79 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 CCDC179H3BU77 68 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 CDC42EP2O14613 210 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 SMIM24O75264 130 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 PITX3O75364 302 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 OR2H2O95918 312 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 PAEPP09466 180 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 TSPAN19P0C672 248 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 IGLC6P0CF74 106 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 HMGA1P17096 107 aaKnown RBP0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 RBP2P50120 134 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 RPS25P62851 125 aaKnown RBP0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 C1orf54Q8WWF1 131 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 SDF2Q99470 211 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 SMIM3Q9BZL3 60 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 ZFC3H1O60293 1989 aaKnown RBP0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 TCHHQ07283 1943 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 NIPBLQ6KC79 2804 aaeCLIP0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 CENPEQ02224 2701 aa0.73□□□□□ -2.29
GAPVD1-211ENST00000467707 SPTBN1Q01082 2364 aaKnown RBP0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 AKAP9Q99996 3911 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 APCP25054 2843 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 PKD1L1Q8TDX9 2849 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 JMJD1CQ15652 2540 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 MYH4Q9Y623 1939 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 TGP01266 2768 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 A0A0D9SFI3 127 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 M0R129 80 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 NPFFO15130 113 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 UQCRHP07919 91 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 ADCYAP1P18509 176 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 PLGLB1Q02325 96 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 TMEM244Q5VVB8 128 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 TCTE3Q8IZS6 198 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 FDCSPQ8NFU4 85 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 U3KQA8 63 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 CUBNO60494 3623 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 KMT2CQ8NEZ4 4911 aaKnown RBP0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 F5P12259 2224 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 MYH8P13535 1937 aa0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 HELZP42694 1942 aaKnown RBP0.72□□□□□ -2.29
GAPVD1-211ENST00000467707 NBASA2RRP1 2371 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 SPAG17Q6Q759 2223 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 UQCRHLA0A096LP55 91 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 SPTY2D1-AS1A0A0U1RR47 76 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 ZNF670-ZNF695F2Z2N8 137 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 F6UZH7 168 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 CORTO00230 105 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 MPC2O95563 127 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 TNFP01375 233 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 IGKCP01834 107 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 DBIP07108 87 aaKnown RBP0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 CMPK1P30085 196 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 NCS1P62166 190 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 WHAMMP3Q1A5X7 153 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 NCMAPQ5T1S8 102 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 TMEM91Q6ZNR0 172 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 C5orf56Q8N8D9 126 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 TMEM203Q969S6 136 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 SNHG12Q9BXW3 62 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 SCN3BQ9NY72 215 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 GNG8Q9UK08 70 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 ACANP16112 2415 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 MYH7P12883 1935 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 CSPG4Q6UVK1 2322 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 PDCD11Q14690 1871 aaKnown RBP0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 TLN2Q9Y4G6 2542 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 BIRC6Q9NR09 4857 aa0.71□□□□□ -2.3
GAPVD1-211ENST00000467707 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
GAPVD1-211ENST00000467707 TACC2O95359 2948 aa0.7□□□□□ -2.3
GAPVD1-211ENST00000467707 BSNQ9UPA5 3926 aa0.7□□□□□ -2.3
GAPVD1-211ENST00000467707 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
GAPVD1-211ENST00000467707 PVALEFA0A1B0GWK0 134 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms