RNA–Protein interactions for RNA: ENST00000467644.5

CMC1-206, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 549 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-206ENST00000467644 SPG11Q96JI7 2443 aa-0.81□□□□□ -2.54
CMC1-206ENST00000467644 LOC285095A0A1B0GVY8 99 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 HMGN4O00479 90 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 ARPC4P59998 168 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 PFDN5Q99471 154 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 UNC13AQ9UPW8 1703 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 KIAA1109Q2LD37 5005 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 NSD3Q9BZ95 1437 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 KIAA0556O60303 1618 aa-0.82□□□□□ -2.54
CMC1-206ENST00000467644 RYR1P21817 5038 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 FMN2Q9NZ56 1722 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 KNL1Q8NG31 2342 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 TRBV7-4A0A0J9YYF1 115 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 SFT2D2O95562 160 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 MGPP08493 103 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 KRTAP20-2Q3LI61 65 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 TMEM263Q8WUH6 116 aaKnown RBP-0.83□□□□□ -2.54
CMC1-206ENST00000467644 PAIP2BQ9ULR5 123 aaKnown RBP-0.83□□□□□ -2.54
CMC1-206ENST00000467644 SHROOM2Q13796 1616 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 HERC2O95714 4834 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 DNAH6Q9C0G6 4158 aa-0.83□□□□□ -2.54
CMC1-206ENST00000467644 KLK9Q2XQG4 91 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 KRTAP6-2Q3LI66 62 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 TSLPQ969D9 159 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 PPP3R2Q96LZ3 170 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 SNRNP25Q9BV90 132 aaKnown RBP-0.84□□□□□ -2.54
CMC1-206ENST00000467644 NAA60Q9H7X0 242 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 ARHGEF5Q12774 1597 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 HTTP42858 3142 aa-0.84□□□□□ -2.54
CMC1-206ENST00000467644 SPTBN4Q9H254 2564 aa-0.85□□□□□ -2.54
CMC1-206ENST00000467644 HIVEP1P15822 2718 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 REV3LO60673 3130 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 TACC2O95359 2948 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 CPSF1Q10570 1443 aaKnown RBP-0.85□□□□□ -2.55
CMC1-206ENST00000467644 MRPL54Q6P161 138 aaKnown RBP-0.85□□□□□ -2.55
CMC1-206ENST00000467644 AKAP9Q99996 3911 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 HYDINQ4G0P3 5121 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 PAPPA2Q9BXP8 1791 aa-0.85□□□□□ -2.55
CMC1-206ENST00000467644 MAGI1Q96QZ7 1491 aaPredicted RBP-0.86□□□□□ -2.55
CMC1-206ENST00000467644 PDCD11Q14690 1871 aaKnown RBP-0.86□□□□□ -2.55
CMC1-206ENST00000467644 LINC00959A0A1B0GUT2 108 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 COX8AP10176 69 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 C10orf113Q5VZT2 155 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 SPRR4Q96PI1 79 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 SPANXDQ9BXN6 97 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 ANKRD36A6QL64 1941 aa-0.86□□□□□ -2.55
CMC1-206ENST00000467644 EPPK1P58107 5090 aaKnown RBP-0.86□□□□□ -2.55
CMC1-206ENST00000467644 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.86□□□□□ -2.55
CMC1-206ENST00000467644 SETBP1Q9Y6X0 1596 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 ROBO1Q9Y6N7 1651 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 SYS1-DBNDD2H3BUS1 97 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 SSSCA1O60232 199 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 SELENOWP63302 87 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 BTG2P78543 158 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 WHAMMP3Q1A5X7 153 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 Q56UQ5 140 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 MEIG1Q5JSS6 88 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 C8orf59Q8N0T1 100 aaPredicted RBP-0.87□□□□□ -2.55
CMC1-206ENST00000467644 NXT2Q9NPJ8 142 aaKnown RBP-0.87□□□□□ -2.55
CMC1-206ENST00000467644 FAIMQ9NVQ4 179 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 A0A0G2JMZ2 1700 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 NUP188Q5SRE5 1749 aa-0.87□□□□□ -2.55
CMC1-206ENST00000467644 PRRC2CQ9Y520 2896 aaKnown RBP-0.87□□□□□ -2.55
CMC1-206ENST00000467644 TET3O43151 1660 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 SMG6Q86US8 1419 aaKnown RBP-0.88□□□□□ -2.55
CMC1-206ENST00000467644 IGLC1P0CG04 106 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 SPRR2EP22531 72 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 COMMD6Q7Z4G1 85 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 ARL11Q969Q4 196 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 USMG5Q96IX5 58 aa-0.88□□□□□ -2.55
CMC1-206ENST00000467644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.88□□□□□ -2.55
CMC1-206ENST00000467644 HMGXB3Q12766 1538 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 LOC105371267A0A1B0GV96 52 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 MIF4GDA9UHW6 222 aaKnown RBP-0.89□□□□□ -2.55
CMC1-206ENST00000467644 FAM25AB3EWG3 89 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 FAM25CB3EWG5 89 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 FAM25GB3EWG6 89 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 CHKB-CPT1BH3BT56 60 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 UBA52P62987 128 aaKnown RBP-0.89□□□□□ -2.55
CMC1-206ENST00000467644 MYOZ3Q8TDC0 251 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 LINC00470Q9BZP3 86 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 SCN7AQ01118 1682 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 QRICH2Q9H0J4 1663 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 USP9YO00507 2555 aaPredicted RBP-0.89□□□□□ -2.55
CMC1-206ENST00000467644 XRN1Q8IZH2 1706 aaKnown RBP-0.89□□□□□ -2.55
CMC1-206ENST00000467644 NAIPQ13075 1403 aa-0.89□□□□□ -2.55
CMC1-206ENST00000467644 ZZEF1O43149 2961 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 ITPR3Q14573 2671 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 PKD1P98161 4303 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 IFNGP01579 166 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 APOC2P02655 101 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 CATR1Q13166 79 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 DEFB135Q30KP9 77 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 C5orf38Q86SI9 138 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 FDCSPQ8NFU4 85 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 FAM167A-AS1Q96KT0 104 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 LINC01600Q96MT4 127 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 LYSTQ99698 3801 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 CDC42SE2Q9NRR3 84 aa-0.9□□□□□ -2.55
CMC1-206ENST00000467644 UQCR10Q9UDW1 63 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms