RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 DCDP81605 110 aaKnown RBP-0.3□□□□□ -2.46
SATB1-211ENST00000467628 CCDC58Q4VC31 144 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 C8orf59Q8N0T1 100 aaPredicted RBP-0.3□□□□□ -2.46
SATB1-211ENST00000467628 MYOZ3Q8TDC0 251 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 TMEM263Q8WUH6 116 aaKnown RBP-0.3□□□□□ -2.46
SATB1-211ENST00000467628 PP6455Q8WZ26 134 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 HMGXB3Q12766 1538 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 PHLPP1O60346 1717 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 KIF21AQ7Z4S6 1674 aa-0.3□□□□□ -2.46
SATB1-211ENST00000467628 TRANK1O15050 2925 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 RAPGEF6Q8TEU7 1601 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 PRRC2CQ9Y520 2896 aaKnown RBP-0.31□□□□□ -2.46
SATB1-211ENST00000467628 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 FOCADQ5VW36 1801 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 MYH9P35579 1960 aaKnown RBP-0.31□□□□□ -2.46
SATB1-211ENST00000467628 MIF4GDA9UHW6 222 aaKnown RBP-0.31□□□□□ -2.46
SATB1-211ENST00000467628 K7EQZ3 153 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 SFT2D2O95562 160 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 APOC3P02656 99 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 CATR1Q13166 79 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 PIGYQ3MUY2 71 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 MRPL54Q6P161 138 aaKnown RBP-0.31□□□□□ -2.46
SATB1-211ENST00000467628 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 DPH3P1Q9H4G8 78 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 GAPVD1Q14C86 1478 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 NAIPQ13075 1403 aa-0.31□□□□□ -2.46
SATB1-211ENST00000467628 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 ARHGEF5Q12774 1597 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 KMT2CQ8NEZ4 4911 aaKnown RBP-0.32□□□□□ -2.46
SATB1-211ENST00000467628 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 MAGI1Q96QZ7 1491 aaPredicted RBP-0.32□□□□□ -2.46
SATB1-211ENST00000467628 MRC2Q9UBG0 1479 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 WDR7Q9Y4E6 1490 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 LINC00959A0A1B0GUT2 108 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 FAM25AB3EWG3 89 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 FAM25CB3EWG5 89 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 FAM25GB3EWG6 89 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 IFNGP01579 166 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 MGPP08493 103 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 IGLC1P0CG04 106 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 AKAIN1P0CW23 69 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 UBE2D3P61077 147 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 UBE2D2P62837 147 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 C10orf113Q5VZT2 155 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 NXT2Q9NPJ8 142 aaKnown RBP-0.32□□□□□ -2.46
SATB1-211ENST00000467628 IER3IP1Q9Y5U9 82 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 HECTD1Q9ULT8 2610 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 TACC2O95359 2948 aa-0.32□□□□□ -2.46
SATB1-211ENST00000467628 ROCK2O75116 1388 aaKnown RBP-0.32□□□□□ -2.46
SATB1-211ENST00000467628 TET3O43151 1660 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 ROBO1Q9Y6N7 1651 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 SPEF2Q9C093 1822 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 FXYD6-FXYD2A0A087WZ82 144 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 UBE2L5PA0A1B0GUS4 154 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 EFCAB10A6NFE3 127 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 CHKB-CPT1BH3BT56 60 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 UBE2L3P68036 154 aaKnown RBP-0.33□□□□□ -2.46
SATB1-211ENST00000467628 FAM223AQ8IWN6 122 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 TSC22D3Q99576 134 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 DNAH9Q9NYC9 4486 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 KTN1Q86UP2 1357 aaKnown RBP-0.33□□□□□ -2.46
SATB1-211ENST00000467628 EHBP1L1Q8N3D4 1523 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 AKAP9Q99996 3911 aa-0.33□□□□□ -2.46
SATB1-211ENST00000467628 SBF2Q86WG5 1849 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 ADGRL2O95490 1459 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 TRBV7-4A0A0J9YYF1 115 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 ATP5EP56381 51 aaPredicted RBP-0.34□□□□□ -2.46
SATB1-211ENST00000467628 WHAMMP3Q1A5X7 153 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 FAM107BQ9H098 131 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 LINC00846Q9NV44 126 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 DIP2CQ9Y2E4 1556 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 VPS13DQ5THJ4 4388 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 ITPR3Q14573 2671 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 MYH8P13535 1937 aa-0.34□□□□□ -2.46
SATB1-211ENST00000467628 POLA1P09884 1462 aaPredicted RBP-0.35□□□□□ -2.46
SATB1-211ENST00000467628 MYOM2P54296 1465 aa-0.35□□□□□ -2.46
SATB1-211ENST00000467628 SCAPERQ9BY12 1400 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 DOCK2Q92608 1830 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 F6UZH7 168 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 H3BQ15 152 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 DLEU1O43261 78 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 KRTAP6-2Q3LI66 62 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 C9orf153Q5TBE3 101 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 RPL13AP3Q6NVV1 102 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 LINC01600Q96MT4 127 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 LYSTQ99698 3801 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 ARL2-SNX15V9GYD0 113 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 ARHGEF12Q9NZN5 1544 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 KIAA0556O60303 1618 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 C1orf167Q5SNV9 1468 aa-0.35□□□□□ -2.47
SATB1-211ENST00000467628 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 COL4A6Q14031 1691 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 STARD9Q9P2P6 4700 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 HTTP42858 3142 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 A0A1B0GV90 55 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 M0R2T5 61 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms