RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TEX43Q6ZNM6 134 aa7.15□□□□□ -1.26
MSH5-212ENST00000467319 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
MSH5-212ENST00000467319 SCO1O75880 301 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 XGP55808 180 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 HIGD2BQ4VC39 106 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 ZC2HC1BQ5TFG8 222 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
MSH5-212ENST00000467319 TRGC2P03986 189 aa7.13□□□□□ -1.27
MSH5-212ENST00000467319 LINC00614P0C842 121 aa7.13□□□□□ -1.27
MSH5-212ENST00000467319 PAPPA-AS1Q5QFB9 102 aa7.13□□□□□ -1.27
MSH5-212ENST00000467319 SCGB3A1Q96QR1 104 aa7.13□□□□□ -1.27
MSH5-212ENST00000467319 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
MSH5-212ENST00000467319 A0A087WZ39 114 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 HBDP02042 147 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 RAB5BP61020 215 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 PDZD11Q5EBL8 140 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 C5orf38Q86SI9 138 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 CHCHD1Q96BP2 118 aaKnown RBP7.12□□□□□ -1.27
MSH5-212ENST00000467319 VCX2Q9H322 139 aa7.12□□□□□ -1.27
MSH5-212ENST00000467319 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 MALP21145 153 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 LINC00310P59036 64 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 COX6A2Q02221 97 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 PMCHL1Q16048 86 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 OR10D4PQ8NGN7 298 aa7.11□□□□□ -1.27
MSH5-212ENST00000467319 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
MSH5-212ENST00000467319 SDIM1Q6ZPB5 146 aa7.1□□□□□ -1.27
MSH5-212ENST00000467319 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
MSH5-212ENST00000467319 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
MSH5-212ENST00000467319 IGLV5-45A0A087WSX0 123 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
MSH5-212ENST00000467319 APOMO95445 188 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 HAMPP81172 84 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 SPAG11BQ08648 103 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 CIRBPQ14011 172 aaKnown RBP7.09□□□□□ -1.27
MSH5-212ENST00000467319 C2orf48Q96LS8 159 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
MSH5-212ENST00000467319 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 PANO1I0J062 215 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 ATP6V1G1O75348 118 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 HERVK_113P63121 156 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 SEC11AP67812 179 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 PMVKQ15126 192 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 Q8N1X5 172 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 ORAOV1Q8WV07 137 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
MSH5-212ENST00000467319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
MSH5-212ENST00000467319 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 SERF1AO75920 110 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 ATP5LO75964 103 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 CDKN2A-AS1Q9UH64 79 aa7.07□□□□□ -1.28
MSH5-212ENST00000467319 F8WDY8 70 aa7.06□□□□□ -1.28
MSH5-212ENST00000467319 Q6ZRU5 148 aa7.06□□□□□ -1.28
MSH5-212ENST00000467319 BAGE3Q86Y29 109 aa7.06□□□□□ -1.28
MSH5-212ENST00000467319 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
MSH5-212ENST00000467319 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HSBP1O75506 76 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 IGLC3P0DOY3 106 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 S100A1P23297 94 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
MSH5-212ENST00000467319 CIRBP-AS1Q8TBR5 109 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
MSH5-212ENST00000467319 GEMIN7Q9H840 131 aaKnown RBP7.05□□□□□ -1.28
MSH5-212ENST00000467319 A0A096LNI7 61 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
MSH5-212ENST00000467319 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
MSH5-212ENST00000467319 NUPR1O60356 82 aa7.03□□□□□ -1.28
MSH5-212ENST00000467319 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
MSH5-212ENST00000467319 C10orf25Q5T742 122 aa7.03□□□□□ -1.28
MSH5-212ENST00000467319 Q8IZM0 81 aa7.03□□□□□ -1.28
MSH5-212ENST00000467319 FAM19A2Q8N3H0 131 aa7.03□□□□□ -1.28
MSH5-212ENST00000467319 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
MSH5-212ENST00000467319 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
MSH5-212ENST00000467319 NDUFA1O15239 70 aa7.02□□□□□ -1.29
MSH5-212ENST00000467319 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.29
MSH5-212ENST00000467319 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
MSH5-212ENST00000467319 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms