RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 DCHS2Q6V1P9 2916 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 GVINP1Q7Z2Y8 2422 aa-0.33□□□□□ -2.46
ATG3-204ENST00000467275 A0A1B0GV90 55 aa-0.33□□□□□ -2.46
ATG3-204ENST00000467275 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
ATG3-204ENST00000467275 IER3IP1Q9Y5U9 82 aa-0.33□□□□□ -2.46
ATG3-204ENST00000467275 TET3O43151 1660 aa-0.33□□□□□ -2.46
ATG3-204ENST00000467275 STAB1Q9NY15 2570 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 FXYD6-FXYD2A0A087WZ82 144 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 MGPP08493 103 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 IGLC1P0CG04 106 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 DEFB123Q8N688 67 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 NSD3Q9BZ95 1437 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 NXT2Q9NPJ8 142 aaKnown RBP-0.34□□□□□ -2.46
ATG3-204ENST00000467275 KMT2CQ8NEZ4 4911 aaKnown RBP-0.34□□□□□ -2.46
ATG3-204ENST00000467275 HMGXB3Q12766 1538 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 PIEZO2Q9H5I5 2752 aa-0.34□□□□□ -2.46
ATG3-204ENST00000467275 LRP1BQ9NZR2 4599 aa-0.35□□□□□ -2.46
ATG3-204ENST00000467275 MYOM2P54296 1465 aa-0.35□□□□□ -2.46
ATG3-204ENST00000467275 FLNAP21333 2647 aaKnown RBP-0.35□□□□□ -2.47
ATG3-204ENST00000467275 SNAPC5O75971 98 aa-0.35□□□□□ -2.47
ATG3-204ENST00000467275 ATP5EP56381 51 aaPredicted RBP-0.35□□□□□ -2.47
ATG3-204ENST00000467275 FAM167A-AS1Q96KT0 104 aa-0.35□□□□□ -2.47
ATG3-204ENST00000467275 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
ATG3-204ENST00000467275 KDM5AP29375 1690 aaKnown RBP-0.35□□□□□ -2.47
ATG3-204ENST00000467275 WNK1Q9H4A3 2382 aa-0.36□□□□□ -2.47
ATG3-204ENST00000467275 FAM24AA6NFZ4 105 aa-0.36□□□□□ -2.47
ATG3-204ENST00000467275 COX6B1P14854 86 aa-0.36□□□□□ -2.47
ATG3-204ENST00000467275 SPRR1BP22528 89 aa-0.36□□□□□ -2.47
ATG3-204ENST00000467275 C10orf113Q5VZT2 155 aa-0.36□□□□□ -2.47
ATG3-204ENST00000467275 ZANQ9Y493 2812 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 ARHGEF12Q9NZN5 1544 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 F6UZH7 168 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 CORTO00230 105 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 GNG11P61952 73 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 WHAMMP3Q1A5X7 153 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 FAM223AQ8IWN6 122 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 FAIMQ9NVQ4 179 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 ARL2-SNX15V9GYD0 113 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 HERC1Q15751 4861 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 WDR7Q9Y4E6 1490 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 NEBP20929 6669 aa-0.37□□□□□ -2.47
ATG3-204ENST00000467275 SCAPERQ9BY12 1400 aa-0.38□□□□□ -2.47
ATG3-204ENST00000467275 MAP1BP46821 2468 aaKnown RBP-0.38□□□□□ -2.47
ATG3-204ENST00000467275 K7EQZ3 153 aa-0.38□□□□□ -2.47
ATG3-204ENST00000467275 GNG4P50150 75 aa-0.38□□□□□ -2.47
ATG3-204ENST00000467275 POLA1P09884 1462 aaPredicted RBP-0.38□□□□□ -2.47
ATG3-204ENST00000467275 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
ATG3-204ENST00000467275 TULP4Q9NRJ4 1543 aa-0.38□□□□□ -2.47
ATG3-204ENST00000467275 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
ATG3-204ENST00000467275 UBE2D3P61077 147 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 UBE2D2P62837 147 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 PPP3R1P63098 170 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 SVBPQ8N300 66 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 URB1O60287 2271 aaKnown RBP-0.39□□□□□ -2.47
ATG3-204ENST00000467275 SPTA1P02549 2419 aa-0.39□□□□□ -2.47
ATG3-204ENST00000467275 HERC2O95714 4834 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 GAPVD1Q14C86 1478 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
ATG3-204ENST00000467275 ATRQ13535 2644 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 TRBV7-4A0A0J9YYF1 115 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 UBA52P62987 128 aaKnown RBP-0.4□□□□□ -2.47
ATG3-204ENST00000467275 Q0VG73 95 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 C2orf88Q9BSF0 95 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 EHBP1L1Q8N3D4 1523 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 FAT1Q14517 4588 aa-0.4□□□□□ -2.47
ATG3-204ENST00000467275 LINC00959A0A1B0GUT2 108 aa-0.41□□□□□ -2.48
ATG3-204ENST00000467275 SARNPP82979 210 aaKnown RBP-0.41□□□□□ -2.48
ATG3-204ENST00000467275 MANBALQ9NQG1 85 aa-0.41□□□□□ -2.48
ATG3-204ENST00000467275 SCN7AQ01118 1682 aa-0.41□□□□□ -2.48
ATG3-204ENST00000467275 NRKQ7Z2Y5 1582 aa-0.41□□□□□ -2.48
ATG3-204ENST00000467275 DIP2CQ9Y2E4 1556 aa-0.41□□□□□ -2.48
ATG3-204ENST00000467275 APC2O95996 2303 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 H3BQ15 152 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 COX6CP09669 75 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 PRO1854Q9UHT4 67 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 EIF4G3O43432 1585 aaKnown RBP-0.42□□□□□ -2.48
ATG3-204ENST00000467275 ADGRL2O95490 1459 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 MRC2Q9UBG0 1479 aa-0.42□□□□□ -2.48
ATG3-204ENST00000467275 MAPKBP1O60336 1514 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 PDCD11Q14690 1871 aaKnown RBP-0.43□□□□□ -2.48
ATG3-204ENST00000467275 NAP1L6A6NFF2 107 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 S100A1P23297 94 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 TMEM203Q969S6 136 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 LINC01600Q96MT4 127 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 GNG8Q9UK08 70 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 CHD8Q9HCK8 2581 aa-0.43□□□□□ -2.48
ATG3-204ENST00000467275 DNAJC13O75165 2243 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 SPHKAPQ2M3C7 1700 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 NUP188Q5SRE5 1749 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 FAM223BA6NKX1 122 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 LINC00587B1AMM8 73 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 TRAPPC2P0DI81 140 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 TRAPPC2BP0DI82 140 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 SFTA2Q6UW10 78 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 PRO1933Q9H354 126 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 PZPP20742 1482 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 TENM2Q9NT68 2774 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 COL4A6Q14031 1691 aa-0.44□□□□□ -2.48
ATG3-204ENST00000467275 EP300Q09472 2414 aaPredicted RBP-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms