RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 F8P00451 2351 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 A4D1N5 150 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 NHLRC4P0CG21 123 aaPredicted RBP8.07□□□□□ -1.12
HPS1-208ENST00000467246 TIRAPP58753 221 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 C9orf66Q5T8R8 295 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 LITAFQ99732 161 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
HPS1-208ENST00000467246 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
HPS1-208ENST00000467246 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
HPS1-208ENST00000467246 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
HPS1-208ENST00000467246 X6R8D5 127 aa8.06□□□□□ -1.12
HPS1-208ENST00000467246 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
HPS1-208ENST00000467246 TMEM101Q96IK0 257 aa8.06□□□□□ -1.12
HPS1-208ENST00000467246 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
HPS1-208ENST00000467246 C9JAW5 83 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 UBE2L6O14933 153 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 HERVK_113P63121 156 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 HERV-K104P63124 156 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 CITED1Q99966 193 aa8.05□□□□□ -1.12
HPS1-208ENST00000467246 PRSS2P07478 247 aa8.04□□□□□ -1.12
HPS1-208ENST00000467246 KIR2DL5BQ8NHK3 375 aa8.04□□□□□ -1.12
HPS1-208ENST00000467246 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
HPS1-208ENST00000467246 PRO1854Q9UHT4 67 aa8.04□□□□□ -1.12
HPS1-208ENST00000467246 GAGE6Q13070 117 aa8.04□□□□□ -1.12
HPS1-208ENST00000467246 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
HPS1-208ENST00000467246 FAM19A3Q7Z5A8 133 aa8.03□□□□□ -1.12
HPS1-208ENST00000467246 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
HPS1-208ENST00000467246 DEFB135Q30KP9 77 aa8.03□□□□□ -1.12
HPS1-208ENST00000467246 TRBV6-8A0A0A6YYG3 113 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 DEFB4AO15263 64 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 NPC2P61916 151 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 ATP6V0E2Q8NHE4 81 aa8.02□□□□□ -1.13
HPS1-208ENST00000467246 NTN5Q8WTR8 489 aaPredicted RBP8.02□□□□□ -1.13
HPS1-208ENST00000467246 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 DAND5Q8N907 189 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 SLC25A20O43772 301 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
HPS1-208ENST00000467246 CHCHD5Q9BSY4 110 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 SPANXCQ9NY87 97 aa8.01□□□□□ -1.13
HPS1-208ENST00000467246 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
HPS1-208ENST00000467246 SMIM9A6NGZ8 99 aa8□□□□□ -1.13
HPS1-208ENST00000467246 F5H768 121 aa8□□□□□ -1.13
HPS1-208ENST00000467246 NDUFA1O15239 70 aa8□□□□□ -1.13
HPS1-208ENST00000467246 GYPEP15421 78 aa8□□□□□ -1.13
HPS1-208ENST00000467246 MIAQ16674 131 aa8□□□□□ -1.13
HPS1-208ENST00000467246 Q9H8V8 135 aa8□□□□□ -1.13
HPS1-208ENST00000467246 A0A0B4J2C4 111 aa8□□□□□ -1.13
HPS1-208ENST00000467246 H7C423 109 aa8□□□□□ -1.13
HPS1-208ENST00000467246 TTC32Q5I0X7 151 aa8□□□□□ -1.13
HPS1-208ENST00000467246 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 Q1RN00 199 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
HPS1-208ENST00000467246 A0A096LPF7 62 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
HPS1-208ENST00000467246 NDUFV3P56181 108 aaKnown RBP7.99□□□□□ -1.13
HPS1-208ENST00000467246 CYSRT1A8MQ03 144 aa7.98□□□□□ -1.13
HPS1-208ENST00000467246 SNCGO76070 127 aa7.98□□□□□ -1.13
HPS1-208ENST00000467246 WFDC9Q8NEX5 89 aa7.98□□□□□ -1.13
HPS1-208ENST00000467246 IGHV4-28A0A0C4DH34 117 aa7.97□□□□□ -1.13
HPS1-208ENST00000467246 TIMM17BO60830 172 aa7.97□□□□□ -1.13
HPS1-208ENST00000467246 APOC4P55056 127 aa7.97□□□□□ -1.13
HPS1-208ENST00000467246 PRO0255Q9UI72 69 aa7.97□□□□□ -1.13
HPS1-208ENST00000467246 LYRM9A8MSI8 78 aa7.96□□□□□ -1.13
HPS1-208ENST00000467246 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
HPS1-208ENST00000467246 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
HPS1-208ENST00000467246 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
HPS1-208ENST00000467246 TMEM262E9PQX1 116 aa7.95□□□□□ -1.14
HPS1-208ENST00000467246 PAX4O43316 350 aa7.95□□□□□ -1.14
HPS1-208ENST00000467246 CELA1Q9UNI1 258 aa7.95□□□□□ -1.14
HPS1-208ENST00000467246 IGHV4-30-4P0DP06 118 aa7.94□□□□□ -1.14
HPS1-208ENST00000467246 IFITM1P13164 125 aa7.94□□□□□ -1.14
HPS1-208ENST00000467246 Q8NAQ8 132 aa7.94□□□□□ -1.14
HPS1-208ENST00000467246 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
HPS1-208ENST00000467246 IGHV3OR16-9A0A0B4J2B5 98 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 MEIG1Q5JSS6 88 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 DAD1P61803 113 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 STAB1Q9NY15 2570 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 WIPF1O43516 503 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 TRIAP1O43715 76 aa7.93□□□□□ -1.14
HPS1-208ENST00000467246 LINC00959A0A1B0GUT2 108 aa7.92□□□□□ -1.14
HPS1-208ENST00000467246 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
HPS1-208ENST00000467246 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms