RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PKIGQ9Y2B9 76 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.63□□□□□ -1.67
CLDN4-204ENST00000466411 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
CLDN4-204ENST00000466411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
CLDN4-204ENST00000466411 CFAP161Q6P656 301 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 Q8N976 141 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 CHCHD1Q96BP2 118 aaKnown RBP4.63□□□□□ -1.67
CLDN4-204ENST00000466411 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 TIMM17AQ99595 171 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 Q9HAA7 133 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 UBE2D4Q9Y2X8 147 aa4.63□□□□□ -1.67
CLDN4-204ENST00000466411 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 LINC00614P0C842 121 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 TEX43Q6ZNM6 134 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 Q6ZRN7 208 aaPredicted RBP4.62□□□□□ -1.67
CLDN4-204ENST00000466411 ERASQ7Z444 233 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 TOMM6Q96B49 74 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 CDC42SE2Q9NRR3 84 aa4.62□□□□□ -1.67
CLDN4-204ENST00000466411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.61□□□□□ -1.67
CLDN4-204ENST00000466411 ATP6V1G1O75348 118 aa4.61□□□□□ -1.67
CLDN4-204ENST00000466411 HBDP02042 147 aa4.61□□□□□ -1.67
CLDN4-204ENST00000466411 KIAA1644Q3SXP7 199 aa4.61□□□□□ -1.67
CLDN4-204ENST00000466411 ENHOQ6UWT2 76 aa4.61□□□□□ -1.67
CLDN4-204ENST00000466411 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
CLDN4-204ENST00000466411 IGLV4-60A0A075B6I1 120 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 GAGE12HA6NDE8 117 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 IFITM10A6NMD0 228 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 COLCA2A8K830 154 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 HSBP1O75506 76 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 ATP5LO75964 103 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 APOMO95445 188 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 TRGC2P03986 189 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 BAGE3Q86Y29 109 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 VCX2Q9H322 139 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
CLDN4-204ENST00000466411 A0A087WTM6 91 aa4.59□□□□□ -1.67
CLDN4-204ENST00000466411 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.59□□□□□ -1.67
CLDN4-204ENST00000466411 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
CLDN4-204ENST00000466411 F8WDY8 70 aa4.59□□□□□ -1.67
CLDN4-204ENST00000466411 COX7A2LO14548 114 aa4.59□□□□□ -1.67
CLDN4-204ENST00000466411 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
CLDN4-204ENST00000466411 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
CLDN4-204ENST00000466411 PACRGQ96M98 296 aaPredicted RBP4.59□□□□□ -1.67
CLDN4-204ENST00000466411 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 IGIPA6NJ69 53 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 HERVK_113P63121 156 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 CLPSL2Q6UWE3 100 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 Q6ZUT4 128 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 LINC01561Q8N1V8 128 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 Q8N814 137 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 OR10D4PQ8NGN7 298 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 MUC2Q02817 5179 aa4.58□□□□□ -1.68
CLDN4-204ENST00000466411 TNXBP22105 4242 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 IGLV10-54A0A075B6I4 117 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 IGHV1-58A0A0C4DH39 117 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 IGKV3OR2-268A0A0C4DH90 116 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 SMR3BP02814 79 aaPredicted RBP4.57□□□□□ -1.68
CLDN4-204ENST00000466411 XCL1P47992 114 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 AKR1D1P51857 326 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 PMVKQ15126 192 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 DEFB104AQ8WTQ1 72 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 AMELXQ99217 191 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 HSPB8Q9UJY1 196 aa4.57□□□□□ -1.68
CLDN4-204ENST00000466411 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
CLDN4-204ENST00000466411 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
CLDN4-204ENST00000466411 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
CLDN4-204ENST00000466411 USP17L23D6RBM5 183 aa4.56□□□□□ -1.68
CLDN4-204ENST00000466411 H3BRM9 83 aa4.56□□□□□ -1.68
CLDN4-204ENST00000466411 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
CLDN4-204ENST00000466411 SFTA2Q6UW10 78 aa4.56□□□□□ -1.68
CLDN4-204ENST00000466411 GEMIN7Q9H840 131 aaKnown RBP4.56□□□□□ -1.68
CLDN4-204ENST00000466411 TRAV12-1A0A0B4J245 112 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 TINCRA0A1B0GVN0 87 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 LEPROTL1O95214 131 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 UBE2D1P51668 147 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 FOXI1Q12951 378 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 PDZD11Q5EBL8 140 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
CLDN4-204ENST00000466411 A0A087WZ39 114 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 hDV102S1A0JD36 115 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 TRIAP1O43715 76 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 HIST1H2BKO60814 126 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 SCO1O75880 301 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 SERF1AO75920 110 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 HIST1H2BJP06899 126 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 HIST1H2BOP23527 126 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 HIST1H2BBP33778 126 aa4.54□□□□□ -1.68
CLDN4-204ENST00000466411 CXCL5P42830 114 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms