RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 PRO1854Q9UHT4 67 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 TRAV13-1A0A0B4J241 112 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 MUSTN1Q8IVN3 82 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 RNF183Q96D59 192 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 LITAFQ99732 161 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
LETM1-202ENST00000466175 DEFB135Q30KP9 77 aa12.84□□□□□ -0.35
LETM1-202ENST00000466175 A4D1N5 150 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 F8W1H4 67 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 TSPAN13O95857 204 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 IFITM1P13164 125 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 GYPEP15421 78 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 MIAQ16674 131 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 CHCHD5Q9BSY4 110 aa12.83□□□□□ -0.36
LETM1-202ENST00000466175 GAGE6Q13070 117 aa12.82□□□□□ -0.36
LETM1-202ENST00000466175 SMIM1B2RUZ4 78 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 G3V4G9 280 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 K7ERU9 68 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 COPS9Q8WXC6 57 aa12.81□□□□□ -0.36
LETM1-202ENST00000466175 IGHV4-28A0A0C4DH34 117 aa12.8□□□□□ -0.36
LETM1-202ENST00000466175 F5H768 121 aa12.8□□□□□ -0.36
LETM1-202ENST00000466175 PAX4O43316 350 aa12.8□□□□□ -0.36
LETM1-202ENST00000466175 HERV-K104P63124 156 aa12.8□□□□□ -0.36
LETM1-202ENST00000466175 DAD1P61803 113 aa12.79□□□□□ -0.36
LETM1-202ENST00000466175 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
LETM1-202ENST00000466175 TRBV20-1A0A075B6N2 111 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 A8MZ25 164 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 PRSS2P07478 247 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 IGHV4-30-4P0DP06 118 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 Q8NAQ8 132 aa12.78□□□□□ -0.36
LETM1-202ENST00000466175 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.36
LETM1-202ENST00000466175 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.36
LETM1-202ENST00000466175 ERG28Q9UKR5 140 aa12.77□□□□□ -0.36
LETM1-202ENST00000466175 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 IGHV3-33P01772 117 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 ATP5G1P05496 136 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 Q9H8V8 135 aa12.77□□□□□ -0.37
LETM1-202ENST00000466175 H3BMG7 143 aa12.76□□□□□ -0.37
LETM1-202ENST00000466175 ADAMTSL4-AS1Q5T5F5 129 aa12.76□□□□□ -0.37
LETM1-202ENST00000466175 PPDPFQ9H3Y8 114 aa12.76□□□□□ -0.37
LETM1-202ENST00000466175 CMYA5Q8N3K9 4069 aa12.75□□□□□ -0.37
LETM1-202ENST00000466175 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
LETM1-202ENST00000466175 PRB2P02812 416 aaPredicted RBP12.74□□□□□ -0.37
LETM1-202ENST00000466175 SH2D6Q7Z4S9 175 aa12.74□□□□□ -0.37
LETM1-202ENST00000466175 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
LETM1-202ENST00000466175 SFTA2Q6UW10 78 aa12.73□□□□□ -0.37
LETM1-202ENST00000466175 A0A087WZ39 114 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 IGHV3OR16-9A0A0B4J2B5 98 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 LINC00959A0A1B0GUT2 108 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 TMEM262E9PQX1 116 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 PSMB2P49721 201 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 RBX1P62877 108 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 SS18Q15532 418 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 COX7B2Q8TF08 81 aa12.71□□□□□ -0.37
LETM1-202ENST00000466175 EIF4EBP3O60516 100 aaPredicted RBP12.7□□□□□ -0.38
LETM1-202ENST00000466175 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
LETM1-202ENST00000466175 TRBV30A0A0K0K1B3 111 aa12.7□□□□□ -0.38
LETM1-202ENST00000466175 DEFB4AO15263 64 aa12.7□□□□□ -0.38
LETM1-202ENST00000466175 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
LETM1-202ENST00000466175 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
LETM1-202ENST00000466175 Q1RN00 199 aa12.69□□□□□ -0.38
LETM1-202ENST00000466175 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
LETM1-202ENST00000466175 IGKV3OR2-268A0A0C4DH90 116 aa12.68□□□□□ -0.38
LETM1-202ENST00000466175 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
LETM1-202ENST00000466175 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
LETM1-202ENST00000466175 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
LETM1-202ENST00000466175 WFDC2Q14508 124 aa12.67□□□□□ -0.38
LETM1-202ENST00000466175 TCL1BO95988 128 aa12.66□□□□□ -0.38
LETM1-202ENST00000466175 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
LETM1-202ENST00000466175 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
LETM1-202ENST00000466175 J3QR89 54 aa12.66□□□□□ -0.38
LETM1-202ENST00000466175 COX6CP09669 75 aa12.65□□□□□ -0.38
LETM1-202ENST00000466175 RNF151Q2KHN1 245 aa12.64□□□□□ -0.39
LETM1-202ENST00000466175 A0A096LPF7 62 aa12.63□□□□□ -0.39
LETM1-202ENST00000466175 H7C2G1 150 aa12.63□□□□□ -0.39
LETM1-202ENST00000466175 NPC2P61916 151 aa12.63□□□□□ -0.39
LETM1-202ENST00000466175 M0QXV9 152 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 ATXN8Q156A1 80 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 LELP1Q5T871 98 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 DAND5Q8N907 189 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 VPS25Q9BRG1 176 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
LETM1-202ENST00000466175 H3BNG1 76 aa12.61□□□□□ -0.39
LETM1-202ENST00000466175 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
LETM1-202ENST00000466175 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
LETM1-202ENST00000466175 Q8IZM0 81 aa12.6□□□□□ -0.39
LETM1-202ENST00000466175 TRIAP1O43715 76 aa12.59□□□□□ -0.39
LETM1-202ENST00000466175 HTN3P15516 51 aa12.59□□□□□ -0.39
LETM1-202ENST00000466175 ETDBQ3ZM63 59 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms