RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ZNF664Q8N3J9 261 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 OR5A1Q8NGJ0 315 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 APLNQ9ULZ1 77 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 MRPS16Q9Y3D3 137 aaKnown RBP3.73□□□□□ -1.81
VPS41-211ENST00000466017 CHTOPQ9Y3Y2 248 aaKnown RBP3.73□□□□□ -1.81
VPS41-211ENST00000466017 IGLV5-45A0A087WSX0 123 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 TRAV9-2A0A087WT02 112 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 IGLL5B9A064 214 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 DPM2O94777 84 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 DNAH10OSP0CZ25 163 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 IGLC3P0DOY3 106 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 PLNP26678 52 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 UBE2D1P51668 147 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 CCL18P55774 89 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 RBX1P62877 108 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 LINC01556Q5JQF7 62 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 C2orf88Q9BSF0 95 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 CHCHD5Q9BSY4 110 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 PRR34Q9NV39 138 aa3.72□□□□□ -1.81
VPS41-211ENST00000466017 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
VPS41-211ENST00000466017 IGLV4-69A0A075B6H9 119 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 IGLV4-60A0A075B6I1 120 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 TRAV8-4A0A0B4J246 113 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 TMEM262E9PQX1 116 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 IGKCP01834 107 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 HERVK_113P63121 156 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 S100A12P80511 92 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 GAGE6Q13070 117 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 Q6ZUT4 128 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 DEFB104AQ8WTQ1 72 aa3.71□□□□□ -1.82
VPS41-211ENST00000466017 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
VPS41-211ENST00000466017 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
VPS41-211ENST00000466017 LINC00959A0A1B0GUT2 108 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 HSBP1L1C9JCN9 74 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 LINC00242Q5T6M2 205 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 C10orf126Q8N4M7 172 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 C12orf57Q99622 126 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 LINC00588Q9Y4M8 146 aa3.7□□□□□ -1.82
VPS41-211ENST00000466017 IGHV3OR16-9A0A0B4J2B5 98 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 IBA57-AS1B1ANH7 110 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 E9PLD3 99 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 C3orf84H3BNL1 204 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 SIVA1O15304 175 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 DLEU1O43261 78 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 ZNF22P17026 224 aaPredicted RBP3.69□□□□□ -1.82
VPS41-211ENST00000466017 SS18Q15532 418 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 MIAQ16674 131 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 MUC7Q8TAX7 377 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 VAMP8Q9BV40 100 aa3.69□□□□□ -1.82
VPS41-211ENST00000466017 PRKDCP78527 4128 aaKnown RBP3.68□□□□□ -1.82
VPS41-211ENST00000466017 A0A087WZ39 114 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 TRAV8-3A0A0A6YYJ7 113 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 TMEM223A0PJW6 202 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 H3BRM9 83 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 ANGP03950 147 aaKnown RBP3.68□□□□□ -1.82
VPS41-211ENST00000466017 HERVK_113P61574 105 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 REG3AQ06141 175 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 CD164L2Q6UWJ8 174 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 ENHOQ6UWT2 76 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 WFDC10BQ8IUB3 73 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 PMCHL2Q9BQD1 86 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
VPS41-211ENST00000466017 Q9H8V8 135 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 TENM3Q9P273 2699 aa3.68□□□□□ -1.82
VPS41-211ENST00000466017 TRAV13-1A0A0B4J241 112 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 H0Y8G0 127 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 LEPROTO15243 131 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 COX8AP10176 69 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 COX6A2Q02221 97 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 SPATA45Q537H7 98 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 LINC00269Q8N2A0 174 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
VPS41-211ENST00000466017 PLECQ15149 4684 aaKnown RBP3.67□□□□□ -1.82
VPS41-211ENST00000466017 hDV102S1A0JD36 115 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 F8WDY8 70 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 NMUP48645 174 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
VPS41-211ENST00000466017 TMEM170BQ5T4T1 132 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 BOD1L2Q8IYS8 172 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 STPG4Q8N801 248 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 RMI2Q96E14 147 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 CDKN2A-AS1Q9UH64 79 aa3.66□□□□□ -1.82
VPS41-211ENST00000466017 PAM16Q9Y3D7 125 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms