RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
NPHP3-203ENST00000465756 LINC00694P0DN24 101 aa7.35□□□□□ -1.23
NPHP3-203ENST00000465756 SEC11AP67812 179 aa7.35□□□□□ -1.23
NPHP3-203ENST00000465756 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
NPHP3-203ENST00000465756 GAGE6Q13070 117 aa7.34□□□□□ -1.23
NPHP3-203ENST00000465756 NUP35Q8NFH5 326 aa7.34□□□□□ -1.23
NPHP3-203ENST00000465756 V9GYV3 84 aa7.34□□□□□ -1.23
NPHP3-203ENST00000465756 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
NPHP3-203ENST00000465756 SDHAF1A6NFY7 115 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 RTL8CO15255 209 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 TSPAN13O95857 204 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 PRSS2P07478 247 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 SMIM27A0A1W2PRY6 76 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 Q6ZSN1 163 aa7.33□□□□□ -1.24
NPHP3-203ENST00000465756 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
NPHP3-203ENST00000465756 LINC01549A6NIU2 74 aa7.32□□□□□ -1.24
NPHP3-203ENST00000465756 LINC00310P59036 64 aa7.32□□□□□ -1.24
NPHP3-203ENST00000465756 SS18Q15532 418 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 PET117Q6UWS5 81 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 ORMDL3Q8N138 153 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 PAPPA-AS1Q5QFB9 102 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 FXYD2P54710 66 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
NPHP3-203ENST00000465756 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-203ENST00000465756 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-203ENST00000465756 TNP2Q05952 138 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 TENM2Q9NT68 2774 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
NPHP3-203ENST00000465756 RPL13AP40429 203 aaKnown RBP7.3□□□□□ -1.24
NPHP3-203ENST00000465756 MEIG1Q5JSS6 88 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 ZC2HC1BQ5TFG8 222 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
NPHP3-203ENST00000465756 RPL32P62910 135 aaKnown RBP7.29□□□□□ -1.24
NPHP3-203ENST00000465756 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
NPHP3-203ENST00000465756 A0A087WTM6 91 aa7.29□□□□□ -1.24
NPHP3-203ENST00000465756 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
NPHP3-203ENST00000465756 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
NPHP3-203ENST00000465756 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 H3BRM9 83 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 AMN1Q8IY45 258 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 REG3AQ06141 175 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 CHAC1Q9BUX1 264 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 NPC2P61916 151 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 IFI27L1Q96BM0 104 aa7.28□□□□□ -1.24
NPHP3-203ENST00000465756 D6R8Y8 96 aa7.27□□□□□ -1.25
NPHP3-203ENST00000465756 HERVK_113P61574 105 aa7.27□□□□□ -1.25
NPHP3-203ENST00000465756 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
NPHP3-203ENST00000465756 COX8AP10176 69 aa7.27□□□□□ -1.25
NPHP3-203ENST00000465756 NXT2Q9NPJ8 142 aaKnown RBP7.27□□□□□ -1.25
NPHP3-203ENST00000465756 ORMDL2Q53FV1 153 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 C9JAW5 83 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 FGF6P10767 208 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 MRPL51Q4U2R6 128 aaKnown RBP7.26□□□□□ -1.25
NPHP3-203ENST00000465756 SPANXA1Q9NS26 97 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
NPHP3-203ENST00000465756 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 LINC00269Q8N2A0 174 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 RPL39LQ96EH5 51 aaKnown RBP7.25□□□□□ -1.25
NPHP3-203ENST00000465756 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 TIMM21Q9BVV7 248 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 M0QXV9 152 aa7.25□□□□□ -1.25
NPHP3-203ENST00000465756 IGKV3OR2-268A0A0C4DH90 116 aa7.24□□□□□ -1.25
NPHP3-203ENST00000465756 MALP21145 153 aa7.24□□□□□ -1.25
NPHP3-203ENST00000465756 KRTAP1-5Q9BYS1 174 aa7.24□□□□□ -1.25
NPHP3-203ENST00000465756 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
NPHP3-203ENST00000465756 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
NPHP3-203ENST00000465756 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
NPHP3-203ENST00000465756 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
NPHP3-203ENST00000465756 Q8N814 137 aa7.23□□□□□ -1.25
NPHP3-203ENST00000465756 BAALCQ8WXS3 180 aa7.22□□□□□ -1.25
NPHP3-203ENST00000465756 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
NPHP3-203ENST00000465756 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
NPHP3-203ENST00000465756 CDK2AP2O75956 126 aa7.22□□□□□ -1.25
NPHP3-203ENST00000465756 RNF185Q96GF1 192 aa7.22□□□□□ -1.25
NPHP3-203ENST00000465756 A0A1B0GVY2 172 aa7.21□□□□□ -1.25
NPHP3-203ENST00000465756 SCGB1A1P11684 91 aa7.21□□□□□ -1.25
NPHP3-203ENST00000465756 CLPSL2Q6UWE3 100 aa7.21□□□□□ -1.25
NPHP3-203ENST00000465756 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.25
NPHP3-203ENST00000465756 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.25
NPHP3-203ENST00000465756 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.25
NPHP3-203ENST00000465756 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
NPHP3-203ENST00000465756 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
NPHP3-203ENST00000465756 HBDP02042 147 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 ZNF815PA8K554 130 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 XGP55808 180 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 Q8N8P6 123 aa7.21□□□□□ -1.26
NPHP3-203ENST00000465756 ODF1Q14990 250 aa7.2□□□□□ -1.26
NPHP3-203ENST00000465756 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms