RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 J3QKU1 62 aa14.04□□□□□ -0.16
SDF4-205ENST00000465727 IGKV2-28A0A075B6P5 120 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 IGKV2D-28P01615 120 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 MIR7-3HGQ8N6C7 128 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 COX7B2Q8TF08 81 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 Q96MF0 132 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
SDF4-205ENST00000465727 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
SDF4-205ENST00000465727 SMIM11BQ8TCY0 68 aa14.02□□□□□ -0.17
SDF4-205ENST00000465727 CREBBPQ92793 2442 aa14.01□□□□□ -0.17
SDF4-205ENST00000465727 A0A087WYN8 130 aa14.01□□□□□ -0.17
SDF4-205ENST00000465727 TRGV1A0A0A0MS02 117 aa14.01□□□□□ -0.17
SDF4-205ENST00000465727 UBE2L6O14933 153 aa14.01□□□□□ -0.17
SDF4-205ENST00000465727 TMEM243Q9BU79 118 aa14□□□□□ -0.17
SDF4-205ENST00000465727 COL12A1Q99715 3063 aa14□□□□□ -0.17
SDF4-205ENST00000465727 DYNLRB2Q8TF09 96 aa14□□□□□ -0.17
SDF4-205ENST00000465727 C14orf132Q9NPU4 83 aa14□□□□□ -0.17
SDF4-205ENST00000465727 J3QLI3 93 aa13.99□□□□□ -0.17
SDF4-205ENST00000465727 DSCR9P59020 149 aa13.99□□□□□ -0.17
SDF4-205ENST00000465727 VPS13CQ709C8 3753 aa13.99□□□□□ -0.17
SDF4-205ENST00000465727 SERP2Q8N6R1 65 aa13.99□□□□□ -0.17
SDF4-205ENST00000465727 CSPG4Q6UVK1 2322 aa13.98□□□□□ -0.17
SDF4-205ENST00000465727 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
SDF4-205ENST00000465727 LOC107984640A0A0U1RRK4 108 aa13.98□□□□□ -0.17
SDF4-205ENST00000465727 DEFB136Q30KP8 78 aa13.98□□□□□ -0.17
SDF4-205ENST00000465727 LINC01356Q8N9X3 169 aa13.98□□□□□ -0.17
SDF4-205ENST00000465727 TMEM258P61165 79 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 MYO18BQ8IUG5 2567 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 hADV29S1A0JD25 119 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 IBA57-AS1B1ANH7 110 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 LINC00846Q9NV44 126 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
SDF4-205ENST00000465727 CRYBG3Q68DQ2 2970 aa13.96□□□□□ -0.17
SDF4-205ENST00000465727 LINC00158P58513 81 aa13.96□□□□□ -0.17
SDF4-205ENST00000465727 DEFB114Q30KQ6 69 aa13.95□□□□□ -0.18
SDF4-205ENST00000465727 C1orf158Q8N1D5 194 aa13.95□□□□□ -0.18
SDF4-205ENST00000465727 CCL18P55774 89 aa13.95□□□□□ -0.18
SDF4-205ENST00000465727 C5orf47Q569G3 176 aa13.95□□□□□ -0.18
SDF4-205ENST00000465727 C9orf129Q5T035 196 aaKnown RBP13.95□□□□□ -0.18
SDF4-205ENST00000465727 Q6YL49 198 aa13.95□□□□□ -0.18
SDF4-205ENST00000465727 FAM19A5Q7Z5A7 132 aaPredicted RBP13.95□□□□□ -0.18
SDF4-205ENST00000465727 GNLYP22749 145 aa13.94□□□□□ -0.18
SDF4-205ENST00000465727 C18orf65Q6ZTR6 163 aa13.94□□□□□ -0.18
SDF4-205ENST00000465727 C4orf3Q8WVX3 66 aa13.94□□□□□ -0.18
SDF4-205ENST00000465727 LECT2O14960 151 aa13.94□□□□□ -0.18
SDF4-205ENST00000465727 FLNCQ14315 2725 aa13.94□□□□□ -0.18
SDF4-205ENST00000465727 IGKV3D-7A0A0C4DH55 119 aa13.93□□□□□ -0.18
SDF4-205ENST00000465727 Q6ZTI0 123 aa13.93□□□□□ -0.18
SDF4-205ENST00000465727 STHQ8IWL8 128 aa13.93□□□□□ -0.18
SDF4-205ENST00000465727 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
SDF4-205ENST00000465727 TOMM7Q9P0U1 55 aa13.92□□□□□ -0.18
SDF4-205ENST00000465727 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
SDF4-205ENST00000465727 SMIM9A6NGZ8 99 aa13.91□□□□□ -0.18
SDF4-205ENST00000465727 S100A7L2Q5SY68 101 aa13.91□□□□□ -0.18
SDF4-205ENST00000465727 ORMDL1Q9P0S3 153 aa13.91□□□□□ -0.18
SDF4-205ENST00000465727 USP17L23D6RBM5 183 aa13.91□□□□□ -0.18
SDF4-205ENST00000465727 LY6G6DO95868 133 aa13.9□□□□□ -0.18
SDF4-205ENST00000465727 ODF3L2Q3SX64 289 aa13.9□□□□□ -0.18
SDF4-205ENST00000465727 LINC01561Q8N1V8 128 aa13.9□□□□□ -0.18
SDF4-205ENST00000465727 TRAV25A0A0B4J276 109 aa13.89□□□□□ -0.19
SDF4-205ENST00000465727 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
SDF4-205ENST00000465727 ATP5EP2Q5VTU8 51 aa13.89□□□□□ -0.19
SDF4-205ENST00000465727 A0A087WZ39 114 aa13.88□□□□□ -0.19
SDF4-205ENST00000465727 TRBV6-4A0A1B0GX49 114 aa13.88□□□□□ -0.19
SDF4-205ENST00000465727 NCR3O14931 201 aa13.88□□□□□ -0.19
SDF4-205ENST00000465727 CCKP06307 115 aa13.88□□□□□ -0.19
SDF4-205ENST00000465727 FSHBP01225 129 aa13.87□□□□□ -0.19
SDF4-205ENST00000465727 PAX4O43316 350 aa13.87□□□□□ -0.19
SDF4-205ENST00000465727 DPH3Q96FX2 82 aa13.87□□□□□ -0.19
SDF4-205ENST00000465727 CYSTM1Q9H1C7 97 aa13.87□□□□□ -0.19
SDF4-205ENST00000465727 A0A087WVE0 104 aa13.86□□□□□ -0.19
SDF4-205ENST00000465727 JMJD7-PLA2G4BH0Y9G9 81 aa13.86□□□□□ -0.19
SDF4-205ENST00000465727 LINC00167Q96N53 147 aa13.86□□□□□ -0.19
SDF4-205ENST00000465727 USP9XQ93008 2570 aaPredicted RBP13.85□□□□□ -0.19
SDF4-205ENST00000465727 LRRK2Q5S007 2527 aa13.84□□□□□ -0.19
SDF4-205ENST00000465727 A0A096LNT2 108 aa13.84□□□□□ -0.19
SDF4-205ENST00000465727 SS18Q15532 418 aa13.84□□□□□ -0.19
SDF4-205ENST00000465727 NOP10Q9NPE3 64 aaKnown RBP13.84□□□□□ -0.19
SDF4-205ENST00000465727 PFN2P35080 140 aa13.83□□□□□ -0.2
SDF4-205ENST00000465727 CELSR2Q9HCU4 2923 aa13.83□□□□□ -0.2
SDF4-205ENST00000465727 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.2
SDF4-205ENST00000465727 C16orf74Q96GX8 76 aa13.83□□□□□ -0.2
SDF4-205ENST00000465727 FLNBO75369 2602 aaKnown RBP13.82□□□□□ -0.2
SDF4-205ENST00000465727 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
SDF4-205ENST00000465727 MAP1AP78559 2803 aaPredicted RBP13.82□□□□□ -0.2
SDF4-205ENST00000465727 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 IGLV4-60A0A075B6I1 120 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 IGKV3OR2-268A0A0C4DH90 116 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 SLPIP03973 132 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 HECTD1Q9ULT8 2610 aa13.81□□□□□ -0.2
SDF4-205ENST00000465727 TRGV2A0A075B6R0 118 aa13.8□□□□□ -0.2
SDF4-205ENST00000465727 TMEM86BQ8N661 226 aa13.8□□□□□ -0.2
SDF4-205ENST00000465727 SETXQ7Z333 2677 aaKnown RBP13.8□□□□□ -0.2
SDF4-205ENST00000465727 NDUFC2-KCTD14E9PQ53 114 aa13.79□□□□□ -0.2
SDF4-205ENST00000465727 TMEM256-PLSCR3K7ERE1 68 aa13.79□□□□□ -0.2
SDF4-205ENST00000465727 TRBV10-3A0A0K0K1G6 114 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 LOC100131303A0A0U1RQF7 123 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 LYPD5Q6UWN5 251 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 C11orf44Q8N8P7 122 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms