RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 TRBV6-4A0A1B0GX49 114 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 SMIM13P0DJ93 91 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 PDE6GP18545 87 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 AMELXQ99217 191 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 COL4A6Q14031 1691 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 CEP250Q9BV73 2442 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 MYO5CQ9NQX4 1742 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 MED12LQ86YW9 2145 aa2.33□□□□□ -2.04
VPS8-217ENST00000465213 CCDC168Q8NDH2 2452 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 LRRK2Q5S007 2527 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 MPDZO75970 2070 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 MYOFQ9NZM1 2061 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 LRRC37A3O60309 1634 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 SEC16AO15027 2179 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 RP1P56715 2156 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 RGPD8O14715 1765 aaPredicted RBP2.32□□□□□ -2.04
VPS8-217ENST00000465213 RGPD5Q99666 1765 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 UMAD1C9J7I0 102 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 HMGN2P05204 90 aaKnown RBP2.32□□□□□ -2.04
VPS8-217ENST00000465213 FAM223AQ8IWN6 122 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 BPESC1Q9GZL8 116 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 NDUFA4L2Q9NRX3 87 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 V9GYH0 126 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 TLN1Q9Y490 2541 aaKnown RBP2.32□□□□□ -2.04
VPS8-217ENST00000465213 IGSF10Q6WRI0 2623 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 ATP7AQ04656 1500 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 CACNA1DQ01668 2161 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 MED13Q9UHV7 2174 aa2.32□□□□□ -2.04
VPS8-217ENST00000465213 DEPDC5O75140 1603 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 POLR1AO95602 1720 aaPredicted RBP2.31□□□□□ -2.04
VPS8-217ENST00000465213 TRBV6-7A0A0A0MS04 114 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 C7orf77A4D0Y5 90 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 JMJD7-PLA2G4BH0Y9G9 81 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 SAA2P0DJI9 122 aaPredicted RBP2.31□□□□□ -2.04
VPS8-217ENST00000465213 GNGT1P63211 74 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 SSBP1Q04837 148 aaKnown RBP2.31□□□□□ -2.04
VPS8-217ENST00000465213 DEFB121Q5J5C9 76 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 ASPMQ8IZT6 3477 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 AGLP35573 1532 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 TIAM1Q13009 1591 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 DOCK2Q92608 1830 aa2.31□□□□□ -2.04
VPS8-217ENST00000465213 ZGRF1Q86YA3 2104 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 SPAG17Q6Q759 2223 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 FBN1P35555 2871 aaKnown RBP2.3□□□□□ -2.04
VPS8-217ENST00000465213 IGLV3-32A0A0A0MS00 114 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 CLPSL1A2RUU4 121 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 PPYP01298 95 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 PSMG4Q5JS54 123 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 C10orf55Q5SWW7 151 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 SPACA4Q8TDM5 124 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 TMEM14BQ9NUH8 114 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 MAST1Q9Y2H9 1570 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 IQGAP1P46940 1657 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 RGPD2P0DJD1 1756 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 BAZ2BQ9UIF8 2168 aaKnown RBP2.3□□□□□ -2.04
VPS8-217ENST00000465213 FLNCQ14315 2725 aa2.3□□□□□ -2.04
VPS8-217ENST00000465213 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 UBR1Q8IWV7 1749 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 LRCOL1A6NCL2 159 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 HMGN4O00479 90 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 PPP1R1CQ8WVI7 109 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 KLK9Q9UKQ9 250 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 FN1P02751 2386 aaKnown RBP2.29□□□□□ -2.04
VPS8-217ENST00000465213 PCNX1Q96RV3 2341 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 MICAL3Q7RTP6 2002 aa2.29□□□□□ -2.04
VPS8-217ENST00000465213 NEXMIFQ5QGS0 1516 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 LMTK2Q8IWU2 1503 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 ASXL1Q8IXJ9 1541 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 A0A087WXM4 84 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 MYMXA0A1B0GTQ4 84 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 A0A1W2PNN7 141 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 IGLV3-1P01715 115 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 RNASE3P12724 160 aaKnown RBP2.28□□□□□ -2.04
VPS8-217ENST00000465213 CCL3L1P16619 93 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 PRR9Q5T870 116 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 FAM74A4Q5TZK3 123 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 C20orf197Q8N268 126 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 STAB1Q9NY15 2570 aa2.28□□□□□ -2.04
VPS8-217ENST00000465213 RICTORQ6R327 1708 aa2.28□□□□□ -2.05
VPS8-217ENST00000465213 HEATR1Q9H583 2144 aaKnown RBP2.27□□□□□ -2.05
VPS8-217ENST00000465213 FLNAP21333 2647 aaKnown RBP2.27□□□□□ -2.05
VPS8-217ENST00000465213 EXPH5Q8NEV8 1989 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 BRWD1Q9NSI6 2320 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 NF1P21359 2839 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 F8WEM9 126 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 PPP1R17O96001 155 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 COX7B2Q8TF08 81 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 KDM3BQ7LBC6 1761 aa2.27□□□□□ -2.05
VPS8-217ENST00000465213 NRXN2Q9P2S2 1712 aa2.26□□□□□ -2.05
VPS8-217ENST00000465213 CREBBPQ92793 2442 aa2.26□□□□□ -2.05
VPS8-217ENST00000465213 H3BRN7 92 aa2.26□□□□□ -2.05
VPS8-217ENST00000465213 SPAG11BQ08648 103 aa2.26□□□□□ -2.05
VPS8-217ENST00000465213 PLGLAQ15195 96 aa2.26□□□□□ -2.05
VPS8-217ENST00000465213 SPAG11AQ6PDA7 123 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms