RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 GHRHP01286 108 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 KRTAP10-9P60411 292 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 TRBV6-5A0A0K0K1A5 114 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 J3QKU1 62 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 PRORYQ9H606 182 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 V9GYY9 64 aa6.66□□□□□ -1.34
HPS4-208ENST00000464362 A0A1B0GX51 115 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 SMIM9A6NGZ8 99 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 C9orf85Q96MD7 179 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 CFAP46Q8IYW2 2715 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 IGLV4-69A0A075B6H9 119 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
HPS4-208ENST00000464362 TMEM89A2RUT3 159 aa6.65□□□□□ -1.35
HPS4-208ENST00000464362 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.35
HPS4-208ENST00000464362 ZNF702PQ9H963 129 aa6.65□□□□□ -1.35
HPS4-208ENST00000464362 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.35
HPS4-208ENST00000464362 BSNQ9UPA5 3926 aa6.65□□□□□ -1.35
HPS4-208ENST00000464362 ATOX1O00244 68 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 APOC4P55056 127 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 TRBV10-1A0A0K0K1A3 114 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 LINC00269Q8N2A0 174 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 ODF3Q96PU9 254 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 UQCRQO14949 82 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 NDUFC2O95298 119 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 DMXL2Q8TDJ6 3036 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
HPS4-208ENST00000464362 H0YGX0 51 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 PSCAO43653 123 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 CAMK2N2Q96S95 79 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 UBE2D1P51668 147 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
HPS4-208ENST00000464362 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 COX8CQ7Z4L0 72 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
HPS4-208ENST00000464362 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 ATMQ13315 3056 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 ACYP1P07311 99 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
HPS4-208ENST00000464362 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 UBE2DNLQ8IWF7 75 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 Q9UF83 564 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 ZZEF1O43149 2961 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 Q6ZSN1 163 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 XAGE1AQ9HD64 81 aa6.62□□□□□ -1.35
HPS4-208ENST00000464362 PRB2P02812 416 aaPredicted RBP6.61□□□□□ -1.35
HPS4-208ENST00000464362 TMEM258P61165 79 aa6.61□□□□□ -1.35
HPS4-208ENST00000464362 COL27A1Q8IZC6 1860 aaPredicted RBP6.61□□□□□ -1.35
HPS4-208ENST00000464362 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
HPS4-208ENST00000464362 ITPR3Q14573 2671 aa6.61□□□□□ -1.35
HPS4-208ENST00000464362 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
HPS4-208ENST00000464362 ODF3L2Q3SX64 289 aa6.61□□□□□ -1.35
HPS4-208ENST00000464362 PLA2G2AP14555 144 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 PYGO1Q9Y3Y4 419 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 NDUFA1O15239 70 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 HRCT1Q6UXD1 115 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 TACC2O95359 2948 aa6.6□□□□□ -1.35
HPS4-208ENST00000464362 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 BBC3Q96PG8 261 aaPredicted RBP6.59□□□□□ -1.35
HPS4-208ENST00000464362 hADV29S1A0JD25 119 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 COX6A2Q02221 97 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 H7C423 109 aa6.59□□□□□ -1.35
HPS4-208ENST00000464362 MRPS36P82909 103 aaKnown RBP6.59□□□□□ -1.35
HPS4-208ENST00000464362 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.36
HPS4-208ENST00000464362 F8WEM9 126 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 TIRAPP58753 221 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
HPS4-208ENST00000464362 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 LST1O00453 97 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
HPS4-208ENST00000464362 REG3AQ06141 175 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 LRRC75A-AS1Q8N1F1 130 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
HPS4-208ENST00000464362 KIF25-AS1Q9Y6Z4 181 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 UBE2D3P61077 147 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 UBE2D2P62837 147 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 C6orf99Q4VX62 202 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 SMR3AQ99954 134 aa6.57□□□□□ -1.36
HPS4-208ENST00000464362 LOC107984640A0A0U1RRK4 108 aa6.56□□□□□ -1.36
HPS4-208ENST00000464362 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
HPS4-208ENST00000464362 CHCHD7Q9BUK0 85 aa6.56□□□□□ -1.36
HPS4-208ENST00000464362 LINC00315P59091 139 aa6.55□□□□□ -1.36
HPS4-208ENST00000464362 C1orf158Q8N1D5 194 aa6.55□□□□□ -1.36
HPS4-208ENST00000464362 UBE2BP63146 152 aa6.55□□□□□ -1.36
HPS4-208ENST00000464362 CDC42SE2Q9NRR3 84 aa6.55□□□□□ -1.36
HPS4-208ENST00000464362 TEP1Q99973 2627 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms