RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HTN1P15515 57 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 HOXD3P31249 432 aaPredicted RBP5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 RNASE13Q5GAN3 156 aaKnown RBP5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 Q6ZSV7 163 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 LINC01561Q8N1V8 128 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 CCL19Q99731 98 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 CDC42SE2Q9NRR3 84 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 MYO18BQ8IUG5 2567 aa5.15□□□□□ -1.59
CLSTN1-204ENST00000464286 ABCA12Q86UK0 2595 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 NBEAQ8NFP9 2946 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 FRYQ5TBA9 3013 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 DMXL1Q9Y485 3027 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 TRAV13-1A0A0B4J241 112 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 A8MZ25 164 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 USP17L23D6RBM5 183 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 F5H768 121 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 TMEM256-PLSCR3K7ERE1 68 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 CCKP06307 115 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 FAM19A5Q7Z5A7 132 aaPredicted RBP5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 C11orf72Q8NBR9 251 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 MUC7Q8TAX7 377 aa5.14□□□□□ -1.59
CLSTN1-204ENST00000464286 HELZ2Q9BYK8 2649 aaKnown RBP5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 IGHV4-61A0A0C4DH41 118 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 PDE6GP18545 87 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 LINC00158P58513 81 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 SOSTDC1Q6X4U4 206 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 MRAPQ8TCY5 172 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 KRTAP17-1Q9BYP8 105 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 DSPP15924 2871 aaKnown RBP5.13□□□□□ -1.59
CLSTN1-204ENST00000464286 IGHV3-38A0A0C4DH36 116 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 ATP5J2P56134 94 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 PROK1P58294 105 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 COX6A2Q02221 97 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 Q8N2B8 174 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 SMIM11BQ8TCY0 68 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 DPH3Q96FX2 82 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
CLSTN1-204ENST00000464286 SPEGQ15772 3267 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 TRGV1A0A0A0MS02 117 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 A0A0U1RRA0 63 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 TRBV6-4A0A1B0GX49 114 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 NDUFC1O43677 76 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 LY6G6DO95868 133 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 STHQ8IWL8 128 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 LINC00167Q96N53 147 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 Q9HAA7 133 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 C14orf132Q9NPU4 83 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 ITPR3Q14573 2671 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 FRYLO94915 3013 aa5.11□□□□□ -1.59
CLSTN1-204ENST00000464286 A0A087WZ39 114 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 LOC107984640A0A0U1RRK4 108 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 A0A1W2PPR1 153 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 NACAE9PAV3 2078 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 LECT2O14960 151 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 COX17Q14061 63 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 C3orf56Q8N813 242 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 SMG1Q96Q15 3661 aaKnown RBP5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 VPS13AQ96RL7 3174 aa5.1□□□□□ -1.59
CLSTN1-204ENST00000464286 IGKV3D-7A0A0C4DH55 119 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 IGHV4-59P01825 116 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 EDN2P20800 178 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 SS18Q15532 418 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 DEFB112Q30KQ8 113 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 LYPD5Q6UWN5 251 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 UPK3BQ9BT76 320 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 LINC00846Q9NV44 126 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 TOMM7Q9P0U1 55 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
CLSTN1-204ENST00000464286 DOPEY2Q9Y3R5 2298 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 A0A087WYN8 130 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 CCL18P55774 89 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 DEFB114Q30KQ6 69 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 C6orf226Q5I0X4 101 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 Q6YL49 198 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 FREM2Q5SZK8 3169 aa5.08□□□□□ -1.6
CLSTN1-204ENST00000464286 EP300Q09472 2414 aaPredicted RBP5.07□□□□□ -1.6
CLSTN1-204ENST00000464286 Q8IZM0 81 aa5.07□□□□□ -1.6
CLSTN1-204ENST00000464286 ZNF702PQ9H963 129 aa5.07□□□□□ -1.6
CLSTN1-204ENST00000464286 ZZEF1O43149 2961 aa5.07□□□□□ -1.6
CLSTN1-204ENST00000464286 MED13LQ71F56 2210 aa5.07□□□□□ -1.6
CLSTN1-204ENST00000464286 C2CD3Q4AC94 2353 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms