RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SERF1AO75920 110 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 MT-ND6P03923 174 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 RPL39P62891 51 aaKnown RBP2.4□□□□□ -2.03
SCFD1-204ENST00000463622 WFDC10BQ8IUB3 73 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 NIT2Q9NQR4 276 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 TRBV27A0A0K0K1C4 114 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 S100A8P05109 93 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 SNRPEP62304 92 aaKnown RBP2.39□□□□□ -2.03
SCFD1-204ENST00000463622 RNASE13Q5GAN3 156 aaKnown RBP2.39□□□□□ -2.03
SCFD1-204ENST00000463622 LYPD5Q6UWN5 251 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 SMIM15Q7Z3B0 74 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 NIT1Q86X76 327 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 FAM19A2Q8N3H0 131 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 C15orf53Q8NAA6 179 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 ATP6V0E2Q8NHE4 81 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 PRADC1Q9BSG0 188 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 ST20Q9HBF5 79 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 ICOSQ9Y6W8 199 aa2.39□□□□□ -2.03
SCFD1-204ENST00000463622 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 LINC01546A6NGU7 62 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 ESDP10768 282 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 NDUFA6P56556 154 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 GAGE2BQ13066 116 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 COX19Q49B96 90 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 GAGE2EQ4V326 116 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 PDZD11Q5EBL8 140 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 GAGE2AQ6NT46 116 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 RNASEKQ6P5S7 137 aaKnown RBP2.38□□□□□ -2.03
SCFD1-204ENST00000463622 SH2D6Q7Z4S9 175 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q8N8P6 123 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q8N976 141 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 GAGE2DQ9UEU5 116 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 TRBV6-8A0A0A6YYG3 113 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 H3BNG1 76 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 H7C1H1 209 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 I3L3M4 83 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 PPBPP02775 128 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 SMR3BP02814 79 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-204ENST00000463622 PMCHP20382 165 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 RPL32P62910 135 aaKnown RBP2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q0VG73 95 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 MRPL23Q16540 153 aaKnown RBP2.38□□□□□ -2.03
SCFD1-204ENST00000463622 MPV17L2Q567V2 206 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q6ZUT4 128 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 C20orf78Q9BR46 151 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 GTSF1LQ9H1H1 148 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 Q9H8V8 135 aa2.38□□□□□ -2.03
SCFD1-204ENST00000463622 C1orf196B1AJZ1 125 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 SCGB1D1O95968 90 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 IGHV3-30P01768 117 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 IGHV3-33P01772 117 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 LINC00614P0C842 121 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 IGHV3-30-3P0DP02 117 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 IGHV3-30-5P0DP03 117 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 CCL18P55774 89 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 COTL1Q14019 142 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 COA6Q5JTJ3 125 aaKnown RBP2.37□□□□□ -2.03
SCFD1-204ENST00000463622 CLPSL2Q6UWE3 100 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 DAZ4Q86SG3 579 aaKnown RBP2.37□□□□□ -2.03
SCFD1-204ENST00000463622 C20orf203Q8NBC4 194 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 DAZ3Q9NR90 486 aaKnown RBP2.37□□□□□ -2.03
SCFD1-204ENST00000463622 LAMTOR2Q9Y2Q5 125 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 UBE2D4Q9Y2X8 147 aa2.37□□□□□ -2.03
SCFD1-204ENST00000463622 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 FGF6P10767 208 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 RBX1P62877 108 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
SCFD1-204ENST00000463622 TTC32Q5I0X7 151 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 LELP1Q5T871 98 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 C2orf66Q6UXQ4 117 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 FA2HQ7L5A8 372 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 BAGE3Q86Y29 109 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 HIST3H2BBQ8N257 126 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 MRPS16Q9Y3D3 137 aaKnown RBP2.36□□□□□ -2.03
SCFD1-204ENST00000463622 IGLV4-3A0A075B6K6 122 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 C5orf52A6NGY3 159 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 FABP4P15090 132 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 FCER1GP30273 86 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 FUSP35637 526 aaKnown RBP eCLIP2.36□□□□□ -2.03
SCFD1-204ENST00000463622 RAB5BP61020 215 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 LAGE3Q14657 143 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 Q6ZRP5 223 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 CHCHD5Q9BSY4 110 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 UPK3BQ9BT76 320 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 TMEM243Q9BU79 118 aa2.36□□□□□ -2.03
SCFD1-204ENST00000463622 NXT2Q9NPJ8 142 aaKnown RBP2.36□□□□□ -2.03
SCFD1-204ENST00000463622 TRBV25-1A0A075B6N4 114 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 HSBP1O75506 76 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 HBDP02042 147 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 WFDC2Q14508 124 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
SCFD1-204ENST00000463622 ENHOQ6UWT2 76 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms