RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TRAV8-3A0A0A6YYJ7 113 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 J3QQQ9 107 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 CCL18P55774 89 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 TSPEAR-AS2P59090 65 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 MAPKAPK5-AS1Q8N8E1 139 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 CCL25O15444 150 aa12.94□□□□□ -0.34
CCDC78-206ENST00000463539 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
CCDC78-206ENST00000463539 PLEKHB2Q96CS7 222 aa12.94□□□□□ -0.34
CCDC78-206ENST00000463539 KLK12Q9UKR0 248 aa12.94□□□□□ -0.34
CCDC78-206ENST00000463539 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
CCDC78-206ENST00000463539 C2orf91Q6ZV80 131 aa12.93□□□□□ -0.34
CCDC78-206ENST00000463539 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
CCDC78-206ENST00000463539 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 XCL1P47992 114 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 LINC00588Q9Y4M8 146 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV3OR16-9A0A0B4J2B5 98 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 SIVA1O15304 175 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 PRR34Q9NV39 138 aa12.92□□□□□ -0.34
CCDC78-206ENST00000463539 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
CCDC78-206ENST00000463539 LINC01556Q5JQF7 62 aa12.91□□□□□ -0.34
CCDC78-206ENST00000463539 NUPR2A6NF83 97 aa12.9□□□□□ -0.34
CCDC78-206ENST00000463539 CRPP02741 224 aa12.9□□□□□ -0.34
CCDC78-206ENST00000463539 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
CCDC78-206ENST00000463539 IGLV10-54A0A075B6I4 117 aa12.89□□□□□ -0.35
CCDC78-206ENST00000463539 CHCHD10Q8WYQ3 142 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-206ENST00000463539 A0A087WZ39 114 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 ENHOQ6UWT2 76 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 KLK5Q9Y337 293 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-206ENST00000463539 DNAH10OSP0CZ25 163 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 CD164L2Q6UWJ8 174 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 SCGB1D4Q6XE38 83 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 C5orf38Q86SI9 138 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 APLNQ9ULZ1 77 aa12.88□□□□□ -0.35
CCDC78-206ENST00000463539 UPK3BQ9BT76 320 aa12.86□□□□□ -0.35
CCDC78-206ENST00000463539 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
CCDC78-206ENST00000463539 DYNC2H1Q8NCM8 4307 aaKnown RBP12.85□□□□□ -0.35
CCDC78-206ENST00000463539 MIAQ16674 131 aa12.85□□□□□ -0.35
CCDC78-206ENST00000463539 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
CCDC78-206ENST00000463539 TRAV8-4A0A0B4J246 113 aa12.84□□□□□ -0.35
CCDC78-206ENST00000463539 M0R143 59 aa12.84□□□□□ -0.35
CCDC78-206ENST00000463539 COX7A2LO14548 114 aa12.83□□□□□ -0.35
CCDC78-206ENST00000463539 GAGE12HA6NDE8 117 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-206ENST00000463539 FOXI1Q12951 378 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 BATFQ16520 125 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 LINC01561Q8N1V8 128 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 SNHG12Q9BXW3 62 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 DNAH7Q8WXX0 4024 aa12.82□□□□□ -0.36
CCDC78-206ENST00000463539 CSMD3Q7Z407 3707 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 EREGO14944 169 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 HSD52Q0P140 79 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 UBE2DNLQ8IWF7 75 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 C10orf126Q8N4M7 172 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 NDUFA1O15239 70 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
CCDC78-206ENST00000463539 MALP21145 153 aa12.8□□□□□ -0.36
CCDC78-206ENST00000463539 Q9H8V8 135 aa12.79□□□□□ -0.36
CCDC78-206ENST00000463539 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
CCDC78-206ENST00000463539 HIST1H4GQ99525 98 aa12.78□□□□□ -0.36
CCDC78-206ENST00000463539 BVES-AS1Q5T3Y7 98 aa12.77□□□□□ -0.37
CCDC78-206ENST00000463539 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
CCDC78-206ENST00000463539 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-206ENST00000463539 IBA57-AS1B1ANH7 110 aa12.76□□□□□ -0.37
CCDC78-206ENST00000463539 PRSS2P07478 247 aa12.76□□□□□ -0.37
CCDC78-206ENST00000463539 TAL2Q16559 108 aa12.76□□□□□ -0.37
CCDC78-206ENST00000463539 ORAOV1Q8WV07 137 aa12.76□□□□□ -0.37
CCDC78-206ENST00000463539 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC78-206ENST00000463539 Q8IZM0 81 aa12.75□□□□□ -0.37
CCDC78-206ENST00000463539 Q9HAA7 133 aa12.75□□□□□ -0.37
CCDC78-206ENST00000463539 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 APOMO95445 188 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 GCSHP23434 173 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 SPANXB1Q9NS25 103 aaPredicted RBP12.74□□□□□ -0.37
CCDC78-206ENST00000463539 IGKV2D-24A0A075B6R9 120 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 HERV-K104P63124 156 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
CCDC78-206ENST00000463539 K7EP13 123 aa12.73□□□□□ -0.37
CCDC78-206ENST00000463539 CEND1Q8N111 149 aa12.73□□□□□ -0.37
CCDC78-206ENST00000463539 PLECQ15149 4684 aaKnown RBP12.73□□□□□ -0.37
CCDC78-206ENST00000463539 TENM2Q9NT68 2774 aa12.72□□□□□ -0.37
CCDC78-206ENST00000463539 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
CCDC78-206ENST00000463539 MUC7Q8TAX7 377 aa12.72□□□□□ -0.37
CCDC78-206ENST00000463539 LYSTQ99698 3801 aa12.72□□□□□ -0.37
CCDC78-206ENST00000463539 LBHQ53QV2 105 aaPredicted RBP12.72□□□□□ -0.37
CCDC78-206ENST00000463539 CFAP161Q6P656 301 aa12.72□□□□□ -0.37
CCDC78-206ENST00000463539 TGP01266 2768 aa12.71□□□□□ -0.37
CCDC78-206ENST00000463539 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
CCDC78-206ENST00000463539 LITAFQ99732 161 aa12.71□□□□□ -0.38
CCDC78-206ENST00000463539 TM2D2Q9BX73 214 aa12.71□□□□□ -0.38
CCDC78-206ENST00000463539 TIMM17BO60830 172 aa12.7□□□□□ -0.38
CCDC78-206ENST00000463539 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
CCDC78-206ENST00000463539 FXYD2P54710 66 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 CKS1BP61024 79 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 SPAG11BQ08648 103 aa12.69□□□□□ -0.38
CCDC78-206ENST00000463539 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms