RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ZNF580Q9UK33 172 aa9.25□□□□□ -0.93
NUP58-206ENST00000463407 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
NUP58-206ENST00000463407 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
NUP58-206ENST00000463407 CDC42SE2Q9NRR3 84 aa9.25□□□□□ -0.93
NUP58-206ENST00000463407 TRIAP1O43715 76 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 SPINK6Q6UWN8 80 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 NHLRC4P0CG21 123 aaPredicted RBP9.24□□□□□ -0.93
NUP58-206ENST00000463407 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 PIEZO1Q92508 2521 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 NAV3Q8IVL0 2385 aa9.24□□□□□ -0.93
NUP58-206ENST00000463407 FHL2Q14192 279 aa9.23□□□□□ -0.93
NUP58-206ENST00000463407 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
NUP58-206ENST00000463407 CYSRT1A8MQ03 144 aa9.23□□□□□ -0.93
NUP58-206ENST00000463407 TIMM17BO60830 172 aa9.23□□□□□ -0.93
NUP58-206ENST00000463407 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
NUP58-206ENST00000463407 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
NUP58-206ENST00000463407 B5MCH6 92 aa9.22□□□□□ -0.93
NUP58-206ENST00000463407 COX17Q14061 63 aa9.22□□□□□ -0.93
NUP58-206ENST00000463407 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
NUP58-206ENST00000463407 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.93
NUP58-206ENST00000463407 Q8IZM0 81 aa9.21□□□□□ -0.93
NUP58-206ENST00000463407 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
NUP58-206ENST00000463407 PLXNB1O43157 2135 aa9.21□□□□□ -0.94
NUP58-206ENST00000463407 CASC2Q6XLA1 102 aa9.21□□□□□ -0.94
NUP58-206ENST00000463407 M0QXV9 152 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
NUP58-206ENST00000463407 SEC61GP60059 68 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 PIEZO2Q9H5I5 2752 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 CHCHD7Q9BUK0 85 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
NUP58-206ENST00000463407 COL4A2P08572 1712 aa9.19□□□□□ -0.94
NUP58-206ENST00000463407 CCDC168Q8NDH2 2452 aa9.19□□□□□ -0.94
NUP58-206ENST00000463407 FHL3Q13643 280 aa9.19□□□□□ -0.94
NUP58-206ENST00000463407 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
NUP58-206ENST00000463407 SS18L2Q9UHA2 77 aa9.19□□□□□ -0.94
NUP58-206ENST00000463407 C6orf223Q8N319 242 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 CCKP06307 115 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 EML5Q05BV3 1969 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
NUP58-206ENST00000463407 SORL1Q92673 2214 aa9.17□□□□□ -0.94
NUP58-206ENST00000463407 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
NUP58-206ENST00000463407 Q8N2B8 174 aa9.17□□□□□ -0.94
NUP58-206ENST00000463407 IGLV4-60A0A075B6I1 120 aa9.17□□□□□ -0.94
NUP58-206ENST00000463407 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
NUP58-206ENST00000463407 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
NUP58-206ENST00000463407 SMIM11BQ8TCY0 68 aa9.17□□□□□ -0.94
NUP58-206ENST00000463407 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
NUP58-206ENST00000463407 Q6ZQY7 126 aa9.16□□□□□ -0.94
NUP58-206ENST00000463407 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
NUP58-206ENST00000463407 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.94
NUP58-206ENST00000463407 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
NUP58-206ENST00000463407 EGFEM1PQ0D2K5 195 aa9.15□□□□□ -0.94
NUP58-206ENST00000463407 COX6A2Q02221 97 aa9.15□□□□□ -0.95
NUP58-206ENST00000463407 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
NUP58-206ENST00000463407 ENHOQ6UWT2 76 aa9.14□□□□□ -0.95
NUP58-206ENST00000463407 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
NUP58-206ENST00000463407 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
NUP58-206ENST00000463407 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
NUP58-206ENST00000463407 Q6ZSN1 163 aa9.13□□□□□ -0.95
NUP58-206ENST00000463407 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
NUP58-206ENST00000463407 C10orf25Q5T742 122 aa9.13□□□□□ -0.95
NUP58-206ENST00000463407 FSHBP01225 129 aa9.12□□□□□ -0.95
NUP58-206ENST00000463407 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
NUP58-206ENST00000463407 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
NUP58-206ENST00000463407 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
NUP58-206ENST00000463407 CELA1Q9UNI1 258 aa9.11□□□□□ -0.95
NUP58-206ENST00000463407 BEAN1Q3B7T3 259 aa9.11□□□□□ -0.95
NUP58-206ENST00000463407 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
NUP58-206ENST00000463407 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
NUP58-206ENST00000463407 URB1-AS1Q96HZ7 61 aa9.1□□□□□ -0.95
NUP58-206ENST00000463407 ATP5EP2Q5VTU8 51 aa9.1□□□□□ -0.95
NUP58-206ENST00000463407 MDFIQ99750 246 aa9.1□□□□□ -0.95
NUP58-206ENST00000463407 ABCA2Q9BZC7 2435 aa9.09□□□□□ -0.95
NUP58-206ENST00000463407 LST1O00453 97 aa9.09□□□□□ -0.95
NUP58-206ENST00000463407 MT-ATP8P03928 68 aa9.09□□□□□ -0.95
NUP58-206ENST00000463407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
NUP58-206ENST00000463407 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
NUP58-206ENST00000463407 TRBV10-3A0A0K0K1G6 114 aa9.07□□□□□ -0.96
NUP58-206ENST00000463407 LINC00310P59036 64 aa9.06□□□□□ -0.96
NUP58-206ENST00000463407 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
NUP58-206ENST00000463407 PRR3P79522 188 aaKnown RBP9.06□□□□□ -0.96
NUP58-206ENST00000463407 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
NUP58-206ENST00000463407 CSDC2Q9Y534 153 aaKnown RBP9.06□□□□□ -0.96
NUP58-206ENST00000463407 AMELXQ99217 191 aa9.05□□□□□ -0.96
NUP58-206ENST00000463407 A0A1B0GUV1 79 aa9.05□□□□□ -0.96
NUP58-206ENST00000463407 F8WDY8 70 aa9.05□□□□□ -0.96
NUP58-206ENST00000463407 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
NUP58-206ENST00000463407 TSPEAR-AS2P59090 65 aa9.04□□□□□ -0.96
NUP58-206ENST00000463407 J3KT08 172 aa9.04□□□□□ -0.96
NUP58-206ENST00000463407 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
NUP58-206ENST00000463407 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
NUP58-206ENST00000463407 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
NUP58-206ENST00000463407 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
NUP58-206ENST00000463407 PTPRBP23467 1997 aa9.01□□□□□ -0.97
NUP58-206ENST00000463407 Q6ZRU5 148 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms