RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 HTN3P15516 51 aa8.9□□□□□ -0.99
VAPB-203ENST00000463370 LITAFQ99732 161 aa8.9□□□□□ -0.99
VAPB-203ENST00000463370 TENM3Q9P273 2699 aa8.89□□□□□ -0.99
VAPB-203ENST00000463370 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
VAPB-203ENST00000463370 F5H768 121 aa8.89□□□□□ -0.99
VAPB-203ENST00000463370 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
VAPB-203ENST00000463370 SAMD5Q5TGI4 173 aa8.89□□□□□ -0.99
VAPB-203ENST00000463370 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 IGLL5B9A064 214 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 ATP5G1P05496 136 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 NBEAL1Q6ZS30 2694 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 SMAGPQ0VAQ4 97 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 Q8N3U1 123 aa8.88□□□□□ -0.99
VAPB-203ENST00000463370 TMEM262E9PQX1 116 aa8.87□□□□□ -0.99
VAPB-203ENST00000463370 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
VAPB-203ENST00000463370 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
VAPB-203ENST00000463370 APOMO95445 188 aa8.86□□□□□ -0.99
VAPB-203ENST00000463370 RBX1P62877 108 aa8.86□□□□□ -0.99
VAPB-203ENST00000463370 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
VAPB-203ENST00000463370 PRB2P02812 416 aaPredicted RBP8.86□□□□□ -0.99
VAPB-203ENST00000463370 K7EP34 96 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 CFC1BP0CG36 223 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 CFC1P0CG37 223 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 CLPSL2Q6UWE3 100 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 A4D1N5 150 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 A6NJY4 79 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 DAND5Q8N907 189 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
VAPB-203ENST00000463370 SPCS1Q9Y6A9 102 aa8.85□□□□□ -0.99
VAPB-203ENST00000463370 NDUFA1O15239 70 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 FABP2P12104 132 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 NPC2P61916 151 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 Q9H8V8 135 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 SFTA2Q6UW10 78 aa8.84□□□□□ -0.99
VAPB-203ENST00000463370 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
VAPB-203ENST00000463370 LINC00959A0A1B0GUT2 108 aa8.83□□□□□ -1
VAPB-203ENST00000463370 A0A1B0GUV1 79 aa8.83□□□□□ -1
VAPB-203ENST00000463370 TSPAN13O95857 204 aa8.83□□□□□ -1
VAPB-203ENST00000463370 A0A0U1RRA0 63 aa8.82□□□□□ -1
VAPB-203ENST00000463370 PRSS2P07478 247 aa8.82□□□□□ -1
VAPB-203ENST00000463370 C5orf38Q86SI9 138 aa8.81□□□□□ -1
VAPB-203ENST00000463370 HUWE1Q7Z6Z7 4374 aaKnown RBP8.81□□□□□ -1
VAPB-203ENST00000463370 Q6ZTC4 211 aa8.81□□□□□ -1
VAPB-203ENST00000463370 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
VAPB-203ENST00000463370 XCL1P47992 114 aa8.8□□□□□ -1
VAPB-203ENST00000463370 MRPL23Q16540 153 aaKnown RBP8.8□□□□□ -1
VAPB-203ENST00000463370 MIAQ16674 131 aa8.8□□□□□ -1
VAPB-203ENST00000463370 SPANXDQ9BXN6 97 aa8.8□□□□□ -1
VAPB-203ENST00000463370 SPANXCQ9NY87 97 aa8.8□□□□□ -1
VAPB-203ENST00000463370 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
VAPB-203ENST00000463370 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
VAPB-203ENST00000463370 A0A0J9YWU9 116 aa8.79□□□□□ -1
VAPB-203ENST00000463370 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
VAPB-203ENST00000463370 ICOSQ9Y6W8 199 aa8.79□□□□□ -1
VAPB-203ENST00000463370 TOMM7Q9P0U1 55 aa8.79□□□□□ -1
VAPB-203ENST00000463370 A0A087WZ39 114 aa8.78□□□□□ -1
VAPB-203ENST00000463370 TIMM17BO60830 172 aa8.78□□□□□ -1
VAPB-203ENST00000463370 COX7B2Q8TF08 81 aa8.78□□□□□ -1
VAPB-203ENST00000463370 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
VAPB-203ENST00000463370 IGLV10-54A0A075B6I4 117 aa8.77□□□□□ -1.01
VAPB-203ENST00000463370 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
VAPB-203ENST00000463370 H3BMG7 143 aa8.77□□□□□ -1.01
VAPB-203ENST00000463370 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
VAPB-203ENST00000463370 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
VAPB-203ENST00000463370 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
VAPB-203ENST00000463370 H7C2G1 150 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 LELP1Q5T871 98 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 IGHV3-33P01772 117 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 SS18Q15532 418 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 MTURNQ8N3F0 131 aa8.76□□□□□ -1.01
VAPB-203ENST00000463370 K7EIL1 84 aa8.75□□□□□ -1.01
VAPB-203ENST00000463370 REG3AQ06141 175 aa8.75□□□□□ -1.01
VAPB-203ENST00000463370 MEIG1Q5JSS6 88 aa8.75□□□□□ -1.01
VAPB-203ENST00000463370 KPRPQ5T749 579 aaPredicted RBP8.75□□□□□ -1.01
VAPB-203ENST00000463370 MDFIQ99750 246 aa8.75□□□□□ -1.01
VAPB-203ENST00000463370 LINC00308Q8TCZ7 52 aa8.75□□□□□ -1.01
VAPB-203ENST00000463370 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
VAPB-203ENST00000463370 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
VAPB-203ENST00000463370 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
VAPB-203ENST00000463370 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
VAPB-203ENST00000463370 HERV-K104P63124 156 aa8.73□□□□□ -1.01
VAPB-203ENST00000463370 SH2D6Q7Z4S9 175 aa8.72□□□□□ -1.01
VAPB-203ENST00000463370 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
VAPB-203ENST00000463370 IFITM1P13164 125 aa8.72□□□□□ -1.01
VAPB-203ENST00000463370 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
VAPB-203ENST00000463370 C11orf45Q8TAV5 145 aa8.72□□□□□ -1.01
VAPB-203ENST00000463370 PSMB2P49721 201 aa8.71□□□□□ -1.01
VAPB-203ENST00000463370 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.01
VAPB-203ENST00000463370 KLK12Q9UKR0 248 aa8.71□□□□□ -1.01
VAPB-203ENST00000463370 TCL1BO95988 128 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms