RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 UBE2D1P51668 147 aa10.75□□□□□ -0.69
HLA-DPA1-245ENST00000463066 CNBPP62633 177 aaKnown RBP10.75□□□□□ -0.69
HLA-DPA1-245ENST00000463066 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
HLA-DPA1-245ENST00000463066 VCX2Q9H322 139 aa10.75□□□□□ -0.69
HLA-DPA1-245ENST00000463066 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
HLA-DPA1-245ENST00000463066 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 LINC00614P0C842 121 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 MALP21145 153 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 Q6ZN92 141 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 Q6ZSA8 131 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 TIMM17AQ99595 171 aa10.74□□□□□ -0.69
HLA-DPA1-245ENST00000463066 ERASQ7Z444 233 aa10.73□□□□□ -0.69
HLA-DPA1-245ENST00000463066 KRTAP4-5Q9BYR2 181 aa10.73□□□□□ -0.69
HLA-DPA1-245ENST00000463066 PANO1I0J062 215 aa10.72□□□□□ -0.69
HLA-DPA1-245ENST00000463066 G0S2P27469 103 aa10.72□□□□□ -0.69
HLA-DPA1-245ENST00000463066 C2orf88Q9BSF0 95 aa10.72□□□□□ -0.69
HLA-DPA1-245ENST00000463066 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
HLA-DPA1-245ENST00000463066 NPSP0C0P6 89 aa10.71□□□□□ -0.69
HLA-DPA1-245ENST00000463066 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
HLA-DPA1-245ENST00000463066 A0A0J9YXV3 536 aa10.7□□□□□ -0.7
HLA-DPA1-245ENST00000463066 SMR3BP02814 79 aaPredicted RBP10.7□□□□□ -0.7
HLA-DPA1-245ENST00000463066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
HLA-DPA1-245ENST00000463066 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 ZNF561-AS1K7EIQ3 104 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 HBDP02042 147 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
HLA-DPA1-245ENST00000463066 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
HLA-DPA1-245ENST00000463066 RAB5BP61020 215 aa10.68□□□□□ -0.7
HLA-DPA1-245ENST00000463066 PDZD11Q5EBL8 140 aa10.68□□□□□ -0.7
HLA-DPA1-245ENST00000463066 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
HLA-DPA1-245ENST00000463066 FAT1Q14517 4588 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 A0A087WZ39 114 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 LINC00310P59036 64 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 SYCNQ0VAF6 134 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 Q6ZRU5 148 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
HLA-DPA1-245ENST00000463066 APOMO95445 188 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 Q8N1X5 172 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
HLA-DPA1-245ENST00000463066 LINC01549A6NIU2 74 aa10.65□□□□□ -0.7
HLA-DPA1-245ENST00000463066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.65□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CAMK2N2Q96S95 79 aa10.65□□□□□ -0.7
HLA-DPA1-245ENST00000463066 CDKN2A-AS1Q9UH64 79 aa10.65□□□□□ -0.7
HLA-DPA1-245ENST00000463066 NDUFA6P56556 154 aa10.64□□□□□ -0.71
HLA-DPA1-245ENST00000463066 PMVKQ15126 192 aa10.64□□□□□ -0.71
HLA-DPA1-245ENST00000463066 C10orf25Q5T742 122 aa10.64□□□□□ -0.71
HLA-DPA1-245ENST00000463066 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
HLA-DPA1-245ENST00000463066 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
HLA-DPA1-245ENST00000463066 NUPR1O60356 82 aa10.63□□□□□ -0.71
HLA-DPA1-245ENST00000463066 SERF1AO75920 110 aa10.63□□□□□ -0.71
HLA-DPA1-245ENST00000463066 KIAA0087Q14695 138 aa10.63□□□□□ -0.71
HLA-DPA1-245ENST00000463066 C2orf48Q96LS8 159 aa10.63□□□□□ -0.71
HLA-DPA1-245ENST00000463066 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
HLA-DPA1-245ENST00000463066 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
HLA-DPA1-245ENST00000463066 ATP6V1G1O75348 118 aa10.62□□□□□ -0.71
HLA-DPA1-245ENST00000463066 A0A096LNI7 61 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 HSBP1O75506 76 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 HERVK_113P63121 156 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 C2orf82Q6UX34 121 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
HLA-DPA1-245ENST00000463066 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 ATP5LO75964 103 aa10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 SEC11AP67812 179 aa10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 SPACA4Q8TDM5 124 aa10.6□□□□□ -0.71
HLA-DPA1-245ENST00000463066 IGLV5-45A0A087WSX0 123 aa10.59□□□□□ -0.71
HLA-DPA1-245ENST00000463066 Q5VSD8 79 aa10.59□□□□□ -0.71
HLA-DPA1-245ENST00000463066 TOMM7Q9P0U1 55 aa10.59□□□□□ -0.71
HLA-DPA1-245ENST00000463066 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 EPM2AB3EWF7 344 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 IGLC3P0DOY3 106 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 MAJINQ3KP22 176 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 DPH3Q96FX2 82 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
HLA-DPA1-245ENST00000463066 A0A087WYN8 130 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 NDUFA1O15239 70 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BJP06899 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 SPINK8P0C7L1 97 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BOP23527 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BBP33778 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BDP58876 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BCP62807 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST2H2BEQ16778 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BHQ93079 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 IFI27L1Q96BM0 104 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms