RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 XKRY2A2RUG3 117 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 C7orf77A4D0Y5 90 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 IFNA1P01562 189 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 TWIST1Q15672 202 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
SMC3-202ENST00000462899 LINC00242Q5T6M2 205 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 TEX261Q6UWH6 196 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 FAM104AQ969W3 186 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 UBE2D4Q9Y2X8 147 aa4.43□□□□□ -1.7
SMC3-202ENST00000462899 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 NDUFA1O15239 70 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 NUPR1O60356 82 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 GIPP09681 153 aaPredicted RBP4.42□□□□□ -1.7
SMC3-202ENST00000462899 CRYGAP11844 174 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 PMCHP20382 165 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 UBE2BP63146 152 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 CTAG1AP78358 180 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 CCL20P78556 96 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
SMC3-202ENST00000462899 UNQ6190/PRO20217Q6UXQ8 127 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 KCNRGQ8N5I3 272 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 SFT2D1Q8WV19 159 aa4.42□□□□□ -1.7
SMC3-202ENST00000462899 FXYD6-FXYD2A0A087WZ82 144 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 A0A1B0GV50 99 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 RAB19A4D1S5 217 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 KIAA0087Q14695 138 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 TMEM241Q24JQ0 296 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 GAGE2EQ4V326 116 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 Q6ZUT4 128 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 NDUFA13Q9P0J0 144 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 GAGE2DQ9UEU5 116 aa4.41□□□□□ -1.7
SMC3-202ENST00000462899 TRAV13-1A0A0B4J241 112 aa4.4□□□□□ -1.71
SMC3-202ENST00000462899 LINC00173Q6ZV60 143 aa4.4□□□□□ -1.71
SMC3-202ENST00000462899 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.71
SMC3-202ENST00000462899 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
SMC3-202ENST00000462899 FAM213BQ8TBF2 198 aa4.4□□□□□ -1.71
SMC3-202ENST00000462899 UMAD1C9J7I0 102 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 K7EN84 100 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 GNG4P50150 75 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
SMC3-202ENST00000462899 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 ST20Q9HBF5 79 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 MANBALQ9NQG1 85 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
SMC3-202ENST00000462899 TRBV30A0A0K0K1B3 111 aa4.38□□□□□ -1.71
SMC3-202ENST00000462899 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
SMC3-202ENST00000462899 FAM229BQ4G0N7 80 aa4.38□□□□□ -1.71
SMC3-202ENST00000462899 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
SMC3-202ENST00000462899 BCE1O60756 84 aa4.37□□□□□ -1.71
SMC3-202ENST00000462899 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
SMC3-202ENST00000462899 MT1HP80294 61 aa4.37□□□□□ -1.71
SMC3-202ENST00000462899 NRACQ8N912 160 aa4.37□□□□□ -1.71
SMC3-202ENST00000462899 BIN3Q9NQY0 253 aa4.37□□□□□ -1.71
SMC3-202ENST00000462899 C22orf24Q9Y442 160 aa4.37□□□□□ -1.71
SMC3-202ENST00000462899 ARPC5O15511 151 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 RAB4AP20338 218 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 ZNF345Q14585 488 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 SMIM15Q7Z3B0 74 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 TMEM191AQ9H0A3 160 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 GNG13Q9P2W3 67 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 TP73-AS1Q9UF72 201 aa4.36□□□□□ -1.71
SMC3-202ENST00000462899 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
SMC3-202ENST00000462899 VCYO14598 125 aa4.35□□□□□ -1.71
SMC3-202ENST00000462899 PDE6DO43924 150 aa4.35□□□□□ -1.71
SMC3-202ENST00000462899 SMAGPQ0VAQ4 97 aa4.35□□□□□ -1.71
SMC3-202ENST00000462899 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
SMC3-202ENST00000462899 FP248Q71RG6 208 aaPredicted RBP4.35□□□□□ -1.71
SMC3-202ENST00000462899 RPL39P62891 51 aaKnown RBP4.34□□□□□ -1.71
SMC3-202ENST00000462899 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.71
SMC3-202ENST00000462899 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
SMC3-202ENST00000462899 OCC1Q8TAD7 63 aa4.34□□□□□ -1.71
SMC3-202ENST00000462899 PACRGQ96M98 296 aaPredicted RBP4.34□□□□□ -1.71
SMC3-202ENST00000462899 USH2AO75445 5202 aa4.33□□□□□ -1.72
SMC3-202ENST00000462899 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
SMC3-202ENST00000462899 FCER1GP30273 86 aa4.33□□□□□ -1.72
SMC3-202ENST00000462899 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
SMC3-202ENST00000462899 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
SMC3-202ENST00000462899 FAM231DQ6ZW35 169 aa4.33□□□□□ -1.72
SMC3-202ENST00000462899 MRPL55Q7Z7F7 128 aaKnown RBP4.33□□□□□ -1.72
SMC3-202ENST00000462899 MED9Q9NWA0 146 aa4.33□□□□□ -1.72
SMC3-202ENST00000462899 ZNF727A8MUV8 499 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
SMC3-202ENST00000462899 RPL32P62910 135 aaKnown RBP4.32□□□□□ -1.72
SMC3-202ENST00000462899 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 LINC00469Q8N7U9 141 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 KIR2DL4Q99706 377 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 SPANXA1Q9NS26 97 aa4.32□□□□□ -1.72
SMC3-202ENST00000462899 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms