RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 RAB5AP20339 215 aa3.39□□□□□ -1.87
PDCD4-204ENST00000462577 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
PDCD4-204ENST00000462577 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
PDCD4-204ENST00000462577 BAALCQ8WXS3 180 aa3.39□□□□□ -1.87
PDCD4-204ENST00000462577 SMCO4Q9NRQ5 59 aa3.39□□□□□ -1.87
PDCD4-204ENST00000462577 DNAH8Q96JB1 4490 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
PDCD4-204ENST00000462577 IGIPA6NJ69 53 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 C1orf196B1AJZ1 125 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
PDCD4-204ENST00000462577 FABP9Q0Z7S8 132 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 SS18Q15532 418 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 KIAA1644Q3SXP7 199 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 DGAT2L7PQ6IED9 249 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 Q6ZUT4 128 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 CHCHD10Q8WYQ3 142 aaPredicted RBP3.38□□□□□ -1.87
PDCD4-204ENST00000462577 CYSLTR1Q9Y271 337 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 TRAPPC1Q9Y5R8 145 aa3.38□□□□□ -1.87
PDCD4-204ENST00000462577 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 IGLV4-3A0A075B6K6 122 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 LOC389332A0A1B0GUA5 103 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 CNBPP62633 177 aaKnown RBP3.37□□□□□ -1.87
PDCD4-204ENST00000462577 CFAP161Q6P656 301 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 CD164L2Q6UWJ8 174 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 Q6ZSA8 131 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 CBLN2Q8IUK8 224 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 C18orf32Q8TCD1 76 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 TOMM6Q96B49 74 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 TMEM141Q96I45 108 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 AMELXQ99217 191 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
PDCD4-204ENST00000462577 HERC2O95714 4834 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 HSPG2P98160 4391 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 LECT2O14960 151 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 PRSS1P07477 247 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 KRTAP10-1P60331 282 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 PAPPA-AS1Q5QFB9 102 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 ERASQ7Z444 233 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 URB1-AS1Q96HZ7 61 aa3.36□□□□□ -1.87
PDCD4-204ENST00000462577 RYR1P21817 5038 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 A0A096LNJ9 63 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 IGHV3OR16-9A0A0B4J2B5 98 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 IFITM10A6NMD0 228 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 COLCA2A8K830 154 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
PDCD4-204ENST00000462577 F8WDY8 70 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 COX7A2LO14548 114 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 LINC00614P0C842 121 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 XCL1P47992 114 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 UBE2D1P51668 147 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 RAB5BP61020 215 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 C10orf25Q5T742 122 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 Q6ZN92 141 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 TEX43Q6ZNM6 134 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 FA2HQ7L5A8 372 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 C9orf163Q8N9P6 203 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 CHCHD1Q96BP2 118 aaKnown RBP3.35□□□□□ -1.87
PDCD4-204ENST00000462577 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
PDCD4-204ENST00000462577 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
PDCD4-204ENST00000462577 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.34□□□□□ -1.87
PDCD4-204ENST00000462577 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.34□□□□□ -1.87
PDCD4-204ENST00000462577 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 IGKV3OR2-268A0A0C4DH90 116 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 hDV102S1A0JD36 115 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 APOMO95445 188 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 HBDP02042 147 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 FUSP35637 526 aaKnown RBP eCLIP3.34□□□□□ -1.87
PDCD4-204ENST00000462577 XGP55808 180 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 SEC11AP67812 179 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
PDCD4-204ENST00000462577 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
PDCD4-204ENST00000462577 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 OR10D4PQ8NGN7 298 aa3.34□□□□□ -1.87
PDCD4-204ENST00000462577 IGHV3-64A0A075B6Q5 118 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 IGLV5-45A0A087WSX0 123 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 A0A087WZ39 114 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 C2orf48Q96LS8 159 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 SCGB3A1Q96QR1 104 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 VCX2Q9H322 139 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 PKIGQ9Y2B9 76 aa3.33□□□□□ -1.88
PDCD4-204ENST00000462577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.32□□□□□ -1.88
PDCD4-204ENST00000462577 ATP5LO75964 103 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 TRGC2P03986 189 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 S100A1P23297 94 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 HERVK_113P63121 156 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 COX6A2Q02221 97 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 PMVKQ15126 192 aa3.32□□□□□ -1.88
PDCD4-204ENST00000462577 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms