RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 LCE1FQ5T754 118 aa3□□□□□ -1.93
BRCA1-206ENST00000461574 RPL7L1Q6DKI1 246 aaKnown RBP3□□□□□ -1.93
BRCA1-206ENST00000461574 SMIM15Q7Z3B0 74 aa3□□□□□ -1.93
BRCA1-206ENST00000461574 FAM19A5Q7Z5A7 132 aaPredicted RBP3□□□□□ -1.93
BRCA1-206ENST00000461574 NUP35Q8NFH5 326 aa3□□□□□ -1.93
BRCA1-206ENST00000461574 MRAP2Q96G30 205 aa3□□□□□ -1.93
BRCA1-206ENST00000461574 OPRPNQ99935 248 aaPredicted RBP3□□□□□ -1.93
BRCA1-206ENST00000461574 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
BRCA1-206ENST00000461574 A0A1B0GV50 99 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 F2Z2F3 143 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-206ENST00000461574 BCL2L11O43521 198 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 IFNA1P01562 189 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 IGLC6P0CF74 106 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 PMCHP20382 165 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-206ENST00000461574 SPAG11BQ08648 103 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 S100ZQ8WXG8 99 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 MARVELD1Q9BSK0 173 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 CRCT1Q9UGL9 99 aa2.99□□□□□ -1.93
BRCA1-206ENST00000461574 FXYD6-FXYD2A0A087WZ82 144 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 FAM168BA1KXE4 195 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 RAB19A4D1S5 217 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 SDHAF1A6NFY7 115 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 C1orf196B1AJZ1 125 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 I3L3M4 83 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 M0QXV9 152 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 UPK1BO75841 260 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 RPL35P42766 123 aaKnown RBP2.98□□□□□ -1.93
BRCA1-206ENST00000461574 LINC01547P58512 204 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-206ENST00000461574 CENPWQ5EE01 88 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 LYZL1Q6UWQ5 148 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 TMUB2Q71RG4 321 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 GATD1Q8NB37 220 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 SFT2D1Q8WV19 159 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 RPL39LQ96EH5 51 aaKnown RBP2.98□□□□□ -1.93
BRCA1-206ENST00000461574 C2orf48Q96LS8 159 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 IMMP2LQ96T52 175 aa2.98□□□□□ -1.93
BRCA1-206ENST00000461574 CARHSP1Q9Y2V2 147 aaKnown RBP2.98□□□□□ -1.93
BRCA1-206ENST00000461574 NDUFA1O15239 70 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 PRSS2P07478 247 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 ESDP10768 282 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 SMAGPQ0VAQ4 97 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 UBE2V1Q13404 147 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 TEX261Q6UWH6 196 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 C5orf38Q86SI9 138 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 KCNRGQ8N5I3 272 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 FAM213BQ8TBF2 198 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 TMEM242Q9NWH2 141 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 ALG5Q9Y673 324 aa2.97□□□□□ -1.93
BRCA1-206ENST00000461574 TRAV13-1A0A0B4J241 112 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 C7orf77A4D0Y5 90 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 G3V3Q6 166 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 TEX46H3BTG2 121 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 CRYGAP11844 174 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 CTRLP40313 264 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 GNG4P50150 75 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 RAB14P61106 215 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-206ENST00000461574 RNASE13Q5GAN3 156 aaKnown RBP2.96□□□□□ -1.94
BRCA1-206ENST00000461574 MRPL52Q86TS9 123 aaKnown RBP2.96□□□□□ -1.94
BRCA1-206ENST00000461574 AKAP14Q86UN6 197 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 OR10D4PQ8NGN7 298 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 ORAOV1Q8WV07 137 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 TMEM18Q96B42 140 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 ST20Q9HBF5 79 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 CDC42SE2Q9NRR3 84 aa2.96□□□□□ -1.94
BRCA1-206ENST00000461574 MRPL35Q9NZE8 188 aaKnown RBP2.96□□□□□ -1.94
BRCA1-206ENST00000461574 IGLV7-46A0A075B6I9 117 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 ZNF861PO60384 105 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 TSHBP01222 138 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 FCER1GP30273 86 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 TPRXLQ17RH7 258 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 LINC00299Q6ZSB3 139 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 RPP21Q9H633 154 aaKnown RBP2.95□□□□□ -1.94
BRCA1-206ENST00000461574 MANBALQ9NQG1 85 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 BIN3Q9NQY0 253 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 GNG13Q9P2W3 67 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
BRCA1-206ENST00000461574 A0A087X002 238 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 UMAD1C9J7I0 102 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 ARPC5O15511 151 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 NUPR1O60356 82 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 GIPP09681 153 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-206ENST00000461574 RPL28P46779 137 aaKnown RBP2.94□□□□□ -1.94
BRCA1-206ENST00000461574 CEBPGP53567 150 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 IFITM3Q01628 133 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 TMEM241Q24JQ0 296 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 Q5BKY6 102 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 C9orf62Q8N4C0 152 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 BORCS7Q96B45 105 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 SMIM12Q96EX1 92 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 CNFNQ9BYD5 112 aa2.94□□□□□ -1.94
BRCA1-206ENST00000461574 SMDT1Q9H4I9 107 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms